Conserved Protein Domain Family
RhaI_grampos

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TIGR02635: RhaI_grampos 
L-rhamnose isomerase, Streptomyces subtype
This clade of sequences is closely related to the L-rhamnose isomerases found in Pseudomonas stutzeri and in a number of the Rhizobiales (TIGR02629). The genes of the family represented here are found in similar genomic contexts which contain genes apparently involved in rhamnose catabolism such as rhamnulose-1-phosphate aldolase (TIGR02632), sugar kinases, and sugar transporters. [Energy metabolism, Sugars]
Statistics
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PSSM-Id: 274239
Aligned: 5 rows
Threshold Bit Score: 723.155
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
novoz:BL00813  21 LSEAKEKLKALKIETPSWGYGDSGTRFKVFQQEGVPRDPFEKMEDASVVHKLTGICPSVAIHIPWDRVDDYGKLKAHAEQ 100 Bacillus liche...
BAD58140       15 AVSVETVLEALAIELPSWAFGNSGTRFKVFGTPGTARTVEEKIADAATVHRLTGLAPTVALHIPWDTVPDYRALARYAED 94  Nocardia farci...
WP_012547977   22 VDEVEKKLKSFKVETPSWGYGNSGTRFYVFKQKGAARNVKEKLQDAAMVHKLTGICPTVALHIPWDMYDDWDELLRYAES 101 Dictyoglomus t...
WP_010988810    4 LAAVKAALKTQAVETPSWAYGNSGTRFKVFAQPGVPRTPQEKLDDAAQVHAYTGAAPTVALHIPWDRVEDYAKLAEYAEE 83  Streptomyces a...
WP_010865259    4 MERIFKELDELKFELPSWAFSDAGTRFAVFHEEGAARNVFERIEDAALVHRLTGCCPSVALHIPWDKVENWEELREFAEE 83  Thermotoga mar...
novoz:BL00813 101 LGLAIGAVNPNLFQDDDYKFGSVTNVKAAIRQKATEQLLECVDIAKQTGSKEISLWLADGTNYPGQGDIRKRKNWMYECL 180 Bacillus liche...
BAD58140       95 LGVALGTINSNTFQDDDYKFGSLTHTDKRIRRKAIDHHLACLEIMAETSSRDLKIWLADGTNYPGQGDIRGRQDRLAESL 174 Nocardia farci...
WP_012547977  102 LGVRPGAINPNLFQDDDYKFGSLTHPDKRVREKAIKHILDCIEIAKKLGSRDISLWLADGTNHPGQDDFRLRKHRLEESL 181 Dictyoglomus t...
WP_010988810   84 RGLKLGTINSNTFQDDAYKLGSICHPEAAVRRKALDHLLECVDIMDATGSKDLKLWFADGTNYPGQDDVRERQDRLTEGL 163 Streptomyces a...
WP_010865259   84 KGLKIGAINPNLFQDPDYKYGSLTNPSEKIRKKAIAHVMECVDIAEKTGSKVISLWLADGTDYPGQDDFRSRKKRLEESL 163 Thermotoga mar...
novoz:BL00813 181 AEVYEALDDDMRLLIEYKFFEPAFYHTDLADWGMAYNLAQKLGPKAEVLVDTGHHAQGTNIEHIVAYLLDEKRLGGFHFN 260 Bacillus liche...
BAD58140      175 ATIYRHVGAGQRMVLEYKFFEPAMYMTDVPDWGTAYAQVSALGERAVVCLDTGHHAPGTNIEFIVAQLLRLRKLGSFDFN 254 Nocardia farci...
WP_012547977  182 KEVYSHLEPNMRLLIEYKFFEPAFYHTDISDWGTAIILSKKLGDKAYVLVDLGHHPLGTNIEQIVAILLDEGKLGGFHFN 261 Dictyoglomus t...
WP_010988810  164 ATVYERLGDDQRMLLEYKFFEPAFYTTDVPDWGTAYAHCLKLGDRAQVVVDTGHHAPGTNIEFIVATLLREGKLGGFDFN 243 Streptomyces a...
WP_010865259  164 RYIYENMPADMYLLIEYKFFEPAFYHTDIPDWGMSYLLSEKLGERALVLVDLGHHPQGTNIEYIVATLLSEKKLGGFHLN 243 Thermotoga mar...
novoz:BL00813 261 SRKYADDDLIAGAHNPYELFLIFSQILDACRDSDpnvrktAEHISYMLDQCHNLEPKIPAVLRSVMNVQTQFAKALLINF 340 Bacillus liche...
BAD58140      255 SRFYADDDLIVGAADPFQLFRILFEVLRGGGLDP------GSGVALMLDQCHNIEDKIPGQLRSVLNVQEMAARAALVDL 328 Nocardia farci...
WP_012547977  262 NKKYADDDLTTGSINPYELFLIFNELVSAEQDg------lKMDIAYMIDESHNLKNKIEEMIQSVENIFRTYAKALIVNR 335 Dictyoglomus t...
WP_010988810  244 SRFYADDDLMVGAADPFQLFRIMYEVIRGGGLT--------SDVAFMLDQCHNIEAKIPAIIRSVMNVQEATAKALLVDR 315 Streptomyces a...
WP_010865259  244 NRKYADDDLTIASINPYEVFLIFKEIVFAKRDPEls--dsAKKVVLMFDQAHITKPKILAMIQSVLIAQELFTKALLIDE 321 Thermotoga mar...
novoz:BL00813 341 DEVKKAQEDHDVLAAEAAIREAFEIDVKPLLCAVREEMNVPPDPLKAYAESGYAEKILARGK 402 Bacillus licheniformis DSM 13 = ...
BAD58140      329 DALTAAQEAGDVLTANAVFMDAFYTDVRPRLAAWRGERGLPEDPMAAYARSGHQQRLAAERA 390 Nocardia farcinica IFM 10152
WP_012547977  336 KVLRKYQEEQDIVMAENTLVKAFETDVMPLIYKVREEMGVPLDPLKAFRESGYMEKVIKERG 397 Dictyoglomus thermophilum
WP_010988810  316 EALRSAQRSGDVLEANAVLMDAYNTDVRPLLAELREETGLDPDPVAAYRRSGWASKIAEERV 377 Streptomyces avermitilis
WP_010865259  322 NRLREAQKNYDVVEAEEILLDAFRTDVRPILREYRRQKGLPEDPLRVFREEDYMEKRRRERR 383 Thermotoga maritima
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