Conserved Protein Domain Family
cas_VVA1548

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TIGR02620: cas_VVA1548 
putative CRISPR-associated protein, VVA1548 family
This model represents a conserved domain of about 95 amino acids exclusively in species with CRISPR (Clustered Regularly Interspaced Short Palidromic Repeats). In all bacterial species with members so far (Vibrio vulnificus YJ016, Mannheimia succiniciproducens MBEL55E, and Nitrosomonas europaea ATCC 19718) and but not in the archaeon Methanothermobacter thermautotrophicus str. Delta H, the gene for this protein is in the midst of a cluster of Cas protein gene near CRISPR repeats.
Statistics
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PSSM-Id: 200203
Aligned: 3 rows
Threshold Bit Score: 161.569
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAD84027   4 WLVTRHPGAIEWVARQGIQWDKHAAHLDPCEITAGDTVIGSLPINLAAEICNRGARYFNLSLNLPAHLRGRELDAATLTA 83  Nitrosomonas europa...
BAC97574  81 WFISRHAGAKQWAVEQGLEVDCFISHLDIAQIGEGDKVIGTLPVQIAASVCEKGARYFHLSLTVPEIWRGKELSLEQMKA 160 Vibrio vulnificus Y...
BAC97575   5 YLICKYSGAQEWLSQQGIHIDHVVDSIHLIDVSQGDKVYGDVPVSLLRDLSKKQVSYWEIKADIHHSVDPTTVEAEYLKR 84  Vibrio vulnificus Y...
CAD84027  84 CEARLEEYIVKKV 96  Nitrosomonas europaea ATCC 19718
BAC97574 161 CQAKIEEFSVRIC 173 Vibrio vulnificus YJ016
BAC97575  85 VDAQLIKTELHIG 97  Vibrio vulnificus YJ016
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