Conserved Protein Domain Family
TIGR02619

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TIGR02619: TIGR02619 
putative CRISPR-associated protein, APE2256 family
This model represents a conserved domain of about 150 amino acids found in at least five archaeal species and three bacterial species, exclusively in species with CRISPR (Clustered Regularly Interspaced Short Palidromic Repeats). In six of eight species, the member of this family is in the vicinity of a CRISPR/Cas locus.
Statistics
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PSSM-Id: 274234
Aligned: 4 rows
Threshold Bit Score: 193.927
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM02506      48 ALMELVEADPKRASAELNTLLRMAERAEREGl--EIDSIALIPTKTANCRLCARVVAEYLREEGYAVWETEPVRAGVDPG 125 Methanopyrus ka...
AAL62579      49 PFVKFAVEEPERCCAELNTVVKAARRWDRLFs--GDVKAVYYSSDTAQGKFVASVLERSLCRVLRARQCVAGVKVAEGLG 126 Pyrobaculum aer...
WP_011432234  38 ALAWMKRTDLELISAETNTYLQLDPTS--------NDALILLHSETPDGLECAQILKLFFEQELGQ----QQVSLVPLPG 105 Synechococcus s...
WP_010866892  77 VVETLVSYAPFAYSAELNAMKYFISQSTKDCsvtMLDEAILYHTDTHAGRVSAEIVKGFLERLCHVKTYSKQVTGLGVFD 156 Aeropyrum pernix
AAM02506     126 -EFWWGLSDLL-ERLEDVGVTDPSRNVWVAATPG-FKPEAAVLTLVASLFG-KPVFYVHEVMNELVEIPPA 192 Methanopyrus kandleri AV19
AAL62579     127 rDFYGGLLKLAhLVKTDVYEARREGRLPYIVATGgYKPESTFAVIAAYIAGaLGVFYIHESFNDVVMLPMV 197 Pyrobaculum aerophilum s...
WP_011432234 106 iNYELEGSSLErMAELLKQLAESARGIVTFAATGgFKAQAMIMAVVGSQLG-VPVCYIHEQYKSLVYLPYL 175 Synechococcus sp. JA-2-3...
WP_010866892 157 r-LFEGLSNLVrEAYCDIKVRIGRGNVVLLNLTGgFKPESGALLLAGSLAGaSAAYYIHEAARKPVFIPII 226 Aeropyrum pernix
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