Conserved Protein Domain Family
cas_Csh1

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TIGR02591: cas_Csh1 
CRISPR-associated protein Cas8b/Csh1, subtype I-B/HMARI
This domain is found in the C-terminal 2/3 of a family of CRISPR associated proteins of the Hmari subtype. Except for the two sequences from halophilic archaea this domain contains a pair of CXXC motifs.
Statistics
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PSSM-Id: 188234
Aligned: 8 rows
Threshold Bit Score: 291.659
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_004043126 228 VGTPDNPIGVFSVKHPDAQPGLR----QDQSWRNYPVGADTAMLFSKGQDLVETCVLRRGGVETYALPYFAGELTPLKAQ 303 Haloferax volcanii
WP_011222266 251 VGTSEDPQNYYLGKQLEKFPGLD----IEEAWRTHPISEDAAVTVMNAGTFVEACTYRTFGTKVYCLPYVWGTISTSDAF 326 Haloarcula mari...
WP_011345044 236 SDTTKLKFKYYITDKIGYASNHD----KKNFYKNYSLCPECYKKLLIAESFIQNKFNNRLGNLN--LFIIPGFLFP---V 306 Carboxydothermu...
WP_012547930 241 YDTTKFPVKFYITKLITFSSDFEgkgvKKGFSKNFSLCRDCYKDIILGIKFIQNNLDTRLGNND--LWIIPGLFFNPLGK 318 Dictyoglomus th...
WP_011032515 164 TLYDSIVYKCYTNDKEIFSNTDG---------ISYGICKDCIFDVLYGRKHVNMFLSTWWGGSE--ILFLP--------- 223 Methanosarcina ...
WP_004082349 176 NSRLSDVFKFATFDKPGFTPFLS----KK---HPIQICDDCRSVLEKARRAIDEKLSFSFFSNNRILWIIPSVPD----Q 244 Thermotoga
WP_012674258 186 VFTTSEIYKFYTLDKPGYIAGGFn---KSNAWKNFPVCESCYLKVDYGRKYIEEHLEFNFYGKTY--YIIPNVILN--TK 258 Sulfurihydrogen...
WP_011099685 173 SKEKEYLKIFFKYDLDKYRKESE----K---YISPNLYNSNDYNVKIKEEIYGLPND-NMGLNSKKPYLENKTRKSKVPY 244 Clostridium tetani
WP_004043126 304 SLYGAI------------QsldresdyddsggsplaRVTYELRESD--DetL--QELAKTELRFYT-ITLPIGDDKNVIA 366 Haloferax volcanii
WP_011222266 327 DLYKLLydatteddgmtpI-----------------ERQYENRNTL--F--GdaQLRFYVSAVMPH-QMSRYDVFGETLN 384 Haloarcula mari...
WP_011345044 307 NLKKQQ------------F-----------------QKWMEFTNNS--F--N--NLKGYSEIAGYE-EMVSDYFENRKIY 350 Carboxydothermu...
WP_012547930 319 ELKESW------------I-----------------RTSREFVKST--F--N--LQEFLSFEERIQ-RNLDEYREFEEIA 362 Dictyoglomus th...
WP_011032515 224 HTYNEE------------V-----------------KEIFEFSKIG--D--L--REGKNLLQQIRE-NECDVINEIGKCG 267 Methanosarcina ...
WP_004082349 245 DILESV------------I-----------------EKIYEIKDTD--K--N--SK--FRSFARLE-EEIEKVLSENE-- 284 Thermotoga
WP_012674258 259 EVMNEY------------L-----------------DILSEAKKRV--S--L--KDKNPTEDENYI-INLLKDHKDG--- 299 Sulfurihydrogen...
WP_011099685 245 LISKEEvl---------iQ-----------------KKFFDYLMNQvaI--G--KSNIYINEKGIKgISNKETLGEDFTG 294 Clostridium tetani
WP_004043126 367 EEPAAPVYWVSELADALAQTVHGPTLNPERGGFAPYDNWSLLE--LATEDFEESRKFGFYRIVGHQFTDSA-----Fayr 439 Haloferax volcanii
WP_011222266 385 GRLLYPKELATKHNQLVQQSAAFHSGAEWTPPMPTHPNWDLLA--GSDEQLHAVSTGWYFAQTFAQRDDDD-----A--- 454 Haloarcula mari...
WP_011345044 351 NQLIFNFLFYQKNKAEFKVLKLIKDIPPSRILKILQLFQKVNE--VYKKHFNQLLPELSLNLNRIYYQIPQqkgknS--- 425 Carboxydothermu...
WP_012547930 363 DYGTVDLLFYERSKEAFKIKEYIKDVHLRRVEKIRNSIREVEN--LGREIFGEG-ENWFLGLEDIYFLIPIrr-gkV--- 435 Dictyoglomus th...
WP_011032515 268 --TDVDILFYSAQKSEWKITYNIKDVIPSRFSKIAELEHKYQS--KSGE-------NLALWQVLAYLLGNSskpseI--- 333 Methanosarcina ...
WP_004082349 285 -RAVYDFVLIEKEQQAERIVLHVEEVSPTRVRRILEESKKIES--QLKED--GFKVSVNFSVIHKFFED----------- 348 Thermotoga
WP_012674258 300 --LCFYFLFLKKENSAERILLLIEDVLPSRISKIFKVKKEVEK--IFN------IENYNFGFLTQFLGN----------- 358 Sulfurihydrogen...
WP_011099685 295 YYLRIQKGKEVEIHNFDTIVNYRAKIEPFKLENVLELEKSELNynVFIYEIGKLKDLIDNVFFYKFLSGN------F--- 365 Clostridium tetani
WP_004043126 440 gdDEDDDFRRVVDHrLIAGVPLDASMLFDEYLRRYHDESEGGDLPp--HQIVAQQLVHLETLSRAGLLNGLDVPIEPPTM 517 Haloferax volcanii
WP_011222266 455 --DADDPRIEALVS-VLSGDAISVETLLEEYVARIITEQTDDDVEgfpSFRVASQFAQLCALATDKLDLLTSDDAAKEPI 531 Haloarcula mari...
WP_011345044 426 --VEYRKFLDLLES-IFTGHPVEKSFIIRQHIELFKIFAFTKEGFnvnPGSEKYKEIELAKACLRANLLNLFLQE-LEIL 501 Carboxydothermu...
WP_012547930 436 --SEYKKMLDLYED-IFLEHRIDKDILIDYFVDLAKVYRFEKFSqy-nIKMVKNTDMGMSLSILKTNLLLKLFEK-LNLI 510 Dictyoglomus th...
WP_011032515 334 --FNTNEAKNFLKN-IFHGNKINRNLFFSRSMSKYKHDYFEGYE-----------NMFMLHRTYNFLVDCGCLDKGWCFV 399 Methanosarcina ...
WP_004082349 349 ---LDRYFNSLFSA-VFSEGTFDKKLLLTLFLSKIRSDFFGNDT---------------LLSAREAFATYVYLRR-LNVL 408 Thermotoga
WP_012674258 359 ---YDKIFFEVIDK-IFRGGKLDFQTLLQIFTKKIRDEFLSGNSI--------------TNTVIYALMNVRFFEE-LGLL 419 Sulfurihydrogen...
WP_011099685 366 --FTKAEDLNINDAtLKRSILLSRDTLFTWFYKGVDNNTWNNLNIsslNLIKGSINKRYLLKAGEQFNLRCSLKNYFEGG 443 Clostridium tetani
WP_004043126 518 TTETETE---------------TDFDTTSLPAIREHRL------E------SFLD---RPLFeaparraaaLAGVLVGQV 567 Haloferax volcanii
WP_011222266 532 TREPTYDtqtmepptdilaadgGHPAAAKLESFIEDTPalapdeD------APHNdqrRGAF---------LLGALVGEI 596 Haloarcula mari...
WP_011345044 502 PKEVEAV---------------ELELDLKAEDL-EYIR------D------MGYTpqqAALF---------LLGVLVGEI 544 Carboxydothermu...
WP_012547930 511 TGGDRMP---------------EFADDVLDKDLQEYIS------K------MQYSeeeAALF---------LLGYLIGEI 554 Dictyoglomus th...
WP_011032515 400 EQTSRGY---------------SMVKYEDLEEFFDFNK------G------FFDSnikKAWF---------LLGRLYGKM 443 Methanosarcina ...
WP_004082349 409 KGGASV---------------------LKGEDFFSRYP------E------FFDEpwkKAVF---------LEGVLANYL 446 Thermotoga
WP_012674258 420 ESK---E---------------GKMEKTKFDEIYEKVG------K------SLNTpakRGIF---------LLGALTQML 460 Sulfurihydrogen...
WP_011099685 444 ISMADVL---------------LEVKNSLREKINKTVK------EnknhedVTLDndrEYYF---------AVGQLAYYL 493 Clostridium tetani
WP_004043126 568 SWHQESERN--VG--RPLDAQTK-----GDQLTKNSLENALTSALEKAKVYALDSEYRSDRD--MLFPETVDRLLETted 636 Haloferax volcanii
WP_011222266 597 GSYQEYDQD--RS--TTLVDQFP-----VKSITKSRIKKVTQETIGKTLTYTRQEKKAGQSYpgTKAEHVVERLRETilk 667 Haloarcula mari...
WP_011345044 545 ASAQHQSN---LN--KAILNKLT-----YQGMSLRRIISFANEVHQKLFQYKKLNPGTEKIY--NSMKKLLDREIPR--- 609 Carboxydothermu...
WP_012547930 555 GYEQIRGAD--LSakKPILNKIN-----FNGISAKNLINLANEVFEKLDQYKIRG-YNEKTF--SVMKSLMDKHIKS--- 621 Dictyoglomus th...
WP_011032515 444 IQESKSYKGgeDK--QSNESHLEknfffGRKYDFKTFVYFSNQCSELMYKYGVQNKGYLKDL--ISTSKELMGAGDS--- 516 Methanosarcina ...
WP_004082349 447 LYLQYVKRN---S--KAFTKKLK-----GLRLTKRDVEGLLPEIRAKIEAYGGMSESVAELF--RETAEAFLEAGN---- 510 Thermotoga
WP_012674258 461 LDIQWSER---KT--TPFFKNLK-----GLKMNEEDIKGLLPKVVNKLMEYERYDKGKQELA--QEISKNLLSQEK---- 524 Sulfurihydrogen...
WP_011099685 494 ISLSKSKN---KS--HSLVNPI---------INAKTNERIKDEIRRLYTRYNYRIEFGSKRV------ERLYSMISS--- 550 Clostridium tetani
WP_004043126 637 m-psaWPIEKRELQFCYVLGHAH 658 Haloferax volcanii
WP_011222266 668 pdpdeWDLDTDDLRFYYALGVTY 690 Haloarcula marismortui
WP_011345044 610 -----WSLSEQENVFYLLSGYSY 627 Carboxydothermus hydrogenoformans
WP_012547930 622 -----WKLSEQENVYYILSGYAF 639 Dictyoglomus thermophilum
WP_011032515 517 ------KLSSDEAKYIFFWGMQQ 533 Methanosarcina mazei
WP_004082349 511 -----WSASPDEISFVFVSGLSL 528 Thermotoga
WP_012674258 525 -----FGLSINEINFYFVSGMAL 542 Sulfurihydrogenibium azorense
WP_011099685 551 -----YVPKGKINGDLIIAGFLK 568 Clostridium tetani
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