Conserved Protein Domain Family
cas_cyan_RAMP

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TIGR02581: cas_cyan_RAMP 
CRISPR-associated RAMP protein, SSO1426 family
Members of this CRISPR-associated (cas) gene family are found in the RAMP-2 subtype of CRISPR/cas locus and designated TM1809 family.
Statistics
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PSSM-Id: 274211
Aligned: 4 rows
Threshold Bit Score: 312.581
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAB64956      14 RSIIKISGKIKNETPLRIGYGKS---QSFTDPTDNPILKVNERPIIPGSSFKGALRSLAEAYVK--------SWNDPRYI 82  Sulfolobus toko...
BAB64957      13 KRQTVIEGILEVQSPLRIGVGKFggmDPASIARDTVLKDAEGTPIIPGSSWKGVFRSEGERVLKrrnl-itcSGVGRDYC 91  Sulfolobus toko...
WP_012258158   8 ASQTRIQAILVMQTALSVSSRLS---LEPTGTDMPVIKGPDGLPFIPGSSIKGVVRFQVERILRt-------WDRRPDFW 77  Chloroflexus
WP_010995645   6 KNRLEIIGILETVTALRISAGRS---TEPIGSDLPVIKDAFGRPLIPGSSLKGALRSRLESFLRgihhdfaaNPAQETEW 82  Nostoc sp. PCC ...
BAB64956      83 VCDLDDNKCTSCNGEE------------------KYCIPCIIFGFKDLSSRVYILDAVAEEYSI------SQRTMVTINR 138 Sulfolobus toko...
BAB64957      92 LNNFRKYDDFQRSLREnyieda------lktfwnYTCLNCKLFGTMSVIGAVKFLESRAIEFKL------GTRTMVAISR 159 Sulfolobus toko...
WP_012258158  78 ACDPFDAPCIPAKKKEqllndaetdqsfaetvwkESCTACRLFGSPWFAGRVAFRDAYLLNPEDlpt-ltQIRDGVGIDR 156 Chloroflexus
WP_010995645  83 SIPPDEMASVKERIKNltpqekea--qlheyiinNTDLVSSLFGSPWLASKFQIRDLTVSKPDDnwfgqyQERDGVAIDR 160 Nostoc sp. PCC ...
BAB64956     139 VFGGQLPGHLYTLDYVEPNSVFNFSMFLYNLnivdgeteEWRKKAVEVVrylLKTLITDGIFIGAKKSAGFGLVKLTSGE 218 Sulfolobus toko...
BAB64957     160 TEGAAARGALVQVEFVEPGSKFTFKIIGNNLp-------NYAIGYLLTI---MKNIHDGFVQIGGHKSRGFGLVKFVNLR 229 Sulfolobus toko...
WP_012258158 157 DLGTARSGIKYDFETVIPGARFGLEILAENLe-------EWEIGFLLTV---LRLWEEGGIAIGGKTTRGPGWGKLQEIK 226 Chloroflexus
WP_010995645 161 DTETAGDGKLYDFQVVPAGTPFIFHAVIENAa-------EWELGMLMIG---LHQFQTEQIPLGGGRSRGLGVVKLIIED 230 Nostoc sp. PCC ...
BAB64956     219 IE 220 Sulfolobus tokodaii str. 7
BAB64957     230 FL 231 Sulfolobus tokodaii str. 7
WP_012258158 227 IQ 228 Chloroflexus
WP_010995645 231 MK 232 Nostoc sp. PCC 7120
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