Conserved Protein Domain Family
cas_csx3
?
TIGR02579: cas_csx3 
CRISPR-associated protein, Csx3 family
Members of this family are found encoded in CRISPR-associated (cas) gene clusters, near CRISPR repeats, in the genomes of several different thermophiles: Archaeoglobus fulgidus (archaeal), Aquifex aeolicus (Aquificae), Dictyoglomus thermophilum (Dictyoglomi), and a thermophilic Synechococcus (Cyanobacteria). It is not yet assigned to a specific CRISPR/cas subtype (hence the x designation csx3).
Links
?
Statistics
?
PSSM-Id: 131628
Aligned: 4 rows
Threshold Bit Score: 136.828
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Download Cn3D
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
O66699        23 TTLIEFELKRD---LVPEDLKKINPPdAVKNKFAntfIVLSGRGPIWLYGFLIHFYHPTKGIGVFDPRLGgAVVVSSHSp 99  Aquifex aeolicu...
O28415        11 FTLIHFEIEKP---IKPEILKEIEIP-SVDTRKG---VVISGRGPIWLHCFLAHKYHHTPFVAVYDPRLG-AVVVQSHS- 81  Archaeoglobus f...
WP_012548748  15 YTILSFRMEKN---LVPSALYNLSPP-NVNTRKG---LILNGRGPIWLYAFLVHFYHPTPFLAVYDPRVG-AVVIASHVp 86  Dictyoglomus th...
WP_011432248  43 FQVIEIELTRPdrlVFPEDLAQLQLPaGINAQLG---VVLTGRAPIWLYGWLVHECHFTRWVACYDPRLG-AVVVSSHTp 118 Synechococcus s...

O66699       100 NKKVGDVIKW 109 Aquifex aeolicus VF5
O28415        82 ELREGDVIDV 91  Archaeoglobus fulgidus DSM 4304
WP_012548748  87 EFRPGDVLDI 96  Dictyoglomus thermophilum
WP_011432248 119 EVRVGQVIPW 128 Synechococcus sp. JA-2-3B'a(2-13)
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap