Conserved Protein Domain Family
cas7_GSU0053
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TIGR02570: cas7_GSU0053 
CRISPR-associated protein GSU0053/csb1, Dpsyc system
Members of this family are found in association with CRISPR repeats and other CRISPR-associated (cas) genes in the genomes of Geobacter sulfurreducens PCA and Desulfotalea psychrophila LSv54 (both Desulfobacterales from the Deltaproteobacteria), Gemmata obscuriglobus (Planctomycete), and Actinomyces naeslundii MG1 (Actinobacteria). This CRISPR/Cas type is designated Dpsych.
Links
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Statistics
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PSSM-Id: 274207
Aligned: 5 rows
Threshold Bit Score: 203.57
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
AAR33388      18 AALVIREQLMPVEGRDgVLFPATFADTG-----YNIDKFDDGGNVCLIDSVGSQANRIEPIFMTKdy------agLVPQI 86  Geobacter sulfu...
CAG34918       4 VAISIKANLKNVNGSD-HIYPPTFAGVGhn--fVALDKGTGKAKAVQVDSVGSFANRIEAELAALg---------ILPEI 71  Desulfotalea ps...
WP_010038634  17 AALVIREWLMPAEGADgVLFPATFAPGGnfpggYNIDTDPSGKNVCLIDSVGSQANRIEPMFMPDkcdg--kyahLVPQI 94  Gemmata obscuri...
WP_009963688   3 LAALKNHPRLLLEAALkPVQGSRFQPTGfpdlgAATFDGPERTKMLLVESAQSVANRLEAVCWDTgnnn--wvapLKGLP 80  Verrucomicrobiu...
WP_003788557  21 AGISVTSKYDSLAGMTvTPPAGTIRQGGe---iVGFFETVDDGKAATIDTWGSQASRCEALLASRfrggnstlaeVLGFP 97  Actinomyces vis...

AAR33388      87 VVQAGNKK----VNLLEAGHRAGDAIIRCSELQQTLRAAFNN------VLNGNAEPLARIAPTSLVFG--VWDSRDT--- 151 Geobacter sulfu...
CAG34918      72 TTSVANQT----LSVNELPHRIYDAILRDSFLGEDSWRNSDIghqllsSTTKNATALLLMLHDTSLGGwdSHAGKSVk-- 145 Desulfotalea ps...
WP_010038634  95 VVKAGEKE----VSILEAGHRAGDAIVRCSSLQRELHDAFND------VLKGDATKLAKIAPTSLVFG--VWDSRDT--- 159 Gemmata obscuri...
WP_009963688  81 AVLVNDKDgkplTNSVLEAHRLNSPYITTTEGFGEIKQAIAFdasrplNLASLVKALLKYDPNSLLHG--IFLEKVAg-- 156 Verrucomicrobiu...
WP_003788557  98 MVVLVDEEgevlTTSVELSHRQADATWR--LIRDELTAKGVDfegiqnATRSQPDALLTGFPTAIPFGwwHSQTKRSqka 175 Actinomyces vis...

AAR33388     152 -----------------------------------QAKLPRLVASTIRAYNVRPLTRSA 175 Geobacter sulfurreducens PCA
CAG34918     146 -----------------------------------GVKISRSVSCEIWGYDVFVAQHTS 169 Desulfotalea psychrophila LSv54
WP_010038634 160 -----------------------------------QAKLPRVVASTVRAEQVRPLTRGA 183 Gemmata obscuriglobus
WP_009963688 157 -----------------------------------VIRLPRALTGFIEAKDVATVASGG 180 Verrucomicrobium spinosum
WP_003788557 176 adkanqggnkeggknarelnatrdkylgyyvmnpaESRSARLFTSEIIATGVSERRRMA 234 Actinomyces viscosus
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