Conserved Protein Domain Family
cas_Csy2

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TIGR02565: cas_Csy2 
CRISPR type I-F/YPEST-associated protein Csy2
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2464 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy2, for CRISPR/Cas Subtype Ypest protein 2.
Statistics
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PSSM-Id: 274204
Aligned: 6 rows
Threshold Bit Score: 378.787
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAK02390       7 YILFDHIKVQSANAISGpLSYGFPALTGLTGAMHALNRKLTHH----PVQFGGVMVACHDYELQTYQNsaFSDRTFKQTR 82  Pasteurella mul...
CAG76580       4 LIILRRIQVENANAIAG-LTYGFPAITHFLGFTHALSRKLQASh---GLTLEGCGVVSHQHQLHAYGS--SWERSFALTR 77  Pectobacterium ...
AAQ59427      12 LLILPRLRVQNANALSSpHTWGFPALSAFTGLMTALERKLGADs---ELAFHGVGVICHGYQAHTNG---DYIQRFNLSR 85  Chromobacterium...
CAG69249       4 YAVIPRIRVQNANMQSNgLLLGGVPLFAANMFAHHLARQLGTTde-gIIYIHHNQQRLGGQAYGRFTPaqRRGAVFIGKK 82  Acinetobacter s...
WP_011927918  17 FLLIKRLEVINANALSSpLTYGFPAITAFTGAVHALSRKINRSealaDIFLDGVLIAAHSCQPQTYREyfNKPFTFIQSR 96  Dichelobacter n...
WP_002211868   4 LIVLHQVRVENANAIAG-LTYGFPAITHFLGYSHALSRKLQSSh---GLTLRGCAVICHYQQVHAYLS--GWDYVFSLTR 77  Yersinia pestis
AAK02390      83 NPIKRNGETASIIEEGKIHLDLSLVVEVHVqDD---RvfealtdktsQASQDFLQTCKNLLWQQRIAGGSVLEi-----G 154 Pasteurella mul...
CAG76580      78 NPLTKEAKTAAFNEEGRMHMTVSLLIRCDG-QI---P----------ADTTALCEHLKQQAQCQRLAGGTVID------I 137 Pectobacterium ...
AAQ59427      86 NPVDKDGGTAAIVEEGRIHLDLTLVFGVSGnAL---Aqn-------dDALAERAAAISRALETMRVAGGTLIPppaghyA 155 Chromobacterium...
CAG69249      83 DYSSKNKYALSLQPTASCHLEFSLVIKFSSsRI---Sp----------------EKLTHILKRSRFAGGQIIEfl----- 138 Acinetobacter s...
WP_011927918  97 HPVEKTGDTAPIIQEGYCHLTVSLLIGVYAkDGylsEeq-------iEALKKQLFIAIQ---QQPLAGGNVIGl-----D 161 Dichelobacter n...
WP_002211868  78 NPLTKEAKTAAFNEEGRMHMTVSLVIECDG-TI---Ang-------dDGANALEKHLASLCLTQRLAGGTITN------I 140 Yersinia pestis
AAK02390     155 N---VQLFNleEDQDIPl------ALM----PAFVLMDAKQELANITEELKTglrigqldeegnvqksclpSCPEATALD 221 Pasteurella mul...
CAG76580     138 ErvtVQSLP--VDEAETrgv--mrRLL----PGFVLRDRTSLLHRHFQTLQQ-------------------AKPQAEMID 190 Pectobacterium ...
AAQ59427     156 PkpqLITLPegEDERAArfralrrRWL----PGFALVARDDLLSGHHARLRE-------------------TAPGATLLD 212 Chromobacterium...
CAG69249     139 ---eITTHAenELEAALk------KIK----TGFAILDRQDLLIEYQQRQQIn------------------------RVQ 181 Acinetobacter s...
WP_011927918 162 AqepIQFYKddVDQCVS-------ELL----PAFVLIDAHKELTAITQELQK-------------------DNPAATALD 211 Dichelobacter n...
WP_002211868 141 RrvkVINYP--ETEVATr------RLLcrllPGFALLDRSELLAEHLNRLRQ-------------------TNPQAEMLD 193 Yersinia pestis
AAK02390     222 ALLEMATVHHIPEHANATASAWq------TYSVKKGRG-WLVPLPVGYQAISPLFAPGQLQHCRTQQYPSQYVETLYSLG 294 Pasteurella mul...
CAG76580     191 AWLDFAALKMQAERDPSDETVQw------KYLPKPGDGgFLTPLMIGYRAISPLYAPGEVDKTRDPHTPFCFAEAAYGIG 264 Pectobacterium ...
AAQ59427     213 AWLDKSRLNHWPEAGDGGQTIW-------RHSRQQGEG-WIVPIPVGYGALSELYPAGSVANARDAAAPFRFVESLYSLG 284 Chromobacterium...
CAG69249     182 AFTQLLALKVDTLRAFFNDQNLs-------WISATNLG-YALLEPLTDQRAGIRQAQDQETTAHAYAEPLTGIVQYFSLG 253 Acinetobacter s...
WP_011927918 212 ALIETASLHHIPSDE--QENNWe------IYSVKKGRG-WLVPIPIGYQGISPQYDAGVMKNARNPHYPSQYVEALYSLG 282 Dichelobacter n...
WP_002211868 194 AWLDFSALKIQAIPPQSDTPVEsgapapwGYVGKPAAG-YLVPIVTGYRAISPLYAPGEVDKTRDPHTPFRFVESLYGIG 272 Yersinia pestis
AAK02390     295 KWVFPLSLPENL-----SQCFWryTAPQNNLYLIS 324 Pasteurella multocida subsp. multocida str. Pm70
CAG76580     265 EWQGAHRISDIS-----QILWE--YDYQNGDYHCR 292 Pectobacterium atrosepticum SCRI1043
AAQ59427     285 EWISPHRLQDAA-----DLLWYpaYDAELGVYRCR 314 Chromobacterium violaceum ATCC 12472
CAG69249     254 EILRKNTEVEDDswhnlQKLLWtyHWSQDDIFLLK 288 Acinetobacter sp. ADP1
WP_011927918 283 KWVFPYSIDLID-----NAMWYqkYDAEKDLYLVT 312 Dichelobacter nodosus
WP_002211868 273 EWRGLHRITDLR-----QLLWG--YHQEGDNYLCR 300 Yersinia pestis
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