Conserved Protein Domain Family
cas_Csy1

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TIGR02564: cas_Csy1 
CRISPR type I-F/YPEST-associated protein Csy1
CRISPR (Clustered Regularly Interspaced Short Palindromic Repeats) is a widespread family of prokaryotic direct repeats with spacers of unique sequence between consecutive repeats. This protein family, typified by YPO2465 of Yersinia pestis, is a CRISPR-associated (Cas) family strictly associated with the Ypest subtype of CRISPR/Cas locus. This family is designated Csy1, for CRISPR/Cas Subtype Ypest protein 1.
Statistics
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PSSM-Id: 274203
Aligned: 5 rows
Threshold Bit Score: 565.994
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAK02389      50 HYYQYDICMSDfAIRMTAQLTFGTHISKGIHPDSRGNNVK-FQAtFIYNEYVGSHCLKTLELDANGDASALPLVALFDYI 128 Pasteurella mul...
CAG76579      56 QKHEVRNWLTD-AASRAGQISLVTHALKFTHSDAKGSSVFnAET-VEDATTLSTATLAQPAIDAVGNAAALDVAKLLQTE 133 Pectobacterium ...
AAQ59428      42 AQYRPQAWLAD-AARRAGQLQLVTHPVKASHPDARGSSLFvTPEsLPPRPEAGSHHLASAASDVVGNAAALDVYKFLKLE 120 Chromobacterium...
WP_002222491  58 ARYEVRNWLTD-AANRAGQIKLATHAPKYTHSDSKSSGILnIELqSKKKDYFSSVDLAEQASDVIGNAAVFDLVKLLQSE 136 Yersinia pestis
WP_011927917  38 KKYRPDIWLQD-AQKKAERFKVGTHISKGIHSQSQGDNVY-FSQk-VDHDYVNTKTVTNNYLDGGGAASDFPLASFFEWE 114 Dichelobacter n...
AAK02389     129 IDDENeltLRELLLADDPRLVGCFADDLELSEQYKKRFQDVLTgeVRELATYELNKQLFWVNSVSsie------ndDYIC 202 Pasteurella mul...
CAG76579     134 HDGDS---LVAALQRGDNRALEALAENPEQLAQWLTGFQQVFT--NRQPSSHKLAKQIYFPLANG-----------EYHL 197 Pectobacterium ...
AAQ59428     121 HEGHT---LLALLRAGDPDLLAALSDDAEQAAAWRDAFCAIAEp-SGGPASHTRAKQIYWPVPPEsglpanphddsHYHL 196 Chromobacterium...
WP_002222491 137 CEGGS---LIKCLEQGDNSVLKLFSNDDELVEEWTTKFKSILN--NEKFTSHKLAKQFYFPVGPd-----------QYHL 200 Yersinia pestis
WP_011927917 115 VITGSgikMRDVIWENGAAVQRCFADDPELSQTYQQTFLTCLQaqPQNPQTDALNKQLLWALPQTddn------rdNYLV 188 Dichelobacter n...
AAK02389     203 LIPLYPSALTHTFYQKIVQTRYSEKNKNASTKRYKKVSGQEHYCSINDLGIVSLGGSNSQNVSQLNSSQKGRHYLLPSLP 282 Pasteurella mul...
CAG76579     198 LSPLYSSSLAHALHQRISAVRFGDEAKAIRQAQRTNQWHDQLSISYPNLAVQNMGGTKPQNISALNSSRSGRSYLLSSAP 277 Pectobacterium ...
AAQ59428     197 LAPLYSSSLSHWLYQRIQRDRFGEEAKAARQARRDRVDHPRGYSDYPLLAEEKKGGTKPQNISQLNSERKGSSYLLASLP 276 Chromobacterium...
WP_002222491 201 LSPLFSSSLAQAMHQRIIEARFSDQSKEAKAAHKAGRWHPTVRVLYLDTAVQHIGGTKPQNISYLNSVRGGKVWLLPCGA 280 Yersinia pestis
WP_011927917 189 LVPLHPSVLTHEFYHKIEAI-----NNNRFDVKSKSVP-QKRYADLLDLAQIKLGGSKPQNISVLTSKQRGINYLLPSLP 262 Dichelobacter n...
AAK02389     283 PRCKT---HKIKPINLLSNTIFNNDLAYICQGGLDKLYSVVKAQKN--------VYTVRDNRSKALNMILESILDIVSEL 351 Pasteurella mul...
CAG76579     278 PQWNSiekPPQQHESIFRPRGEVDYHTRATLAQMQRFLLSVKDVEN--------NRDIRQQRLHYLDQLIDQLFFYVASV 349 Pectobacterium ...
AAQ59428     277 PLWDNsdlRPLYRLDSVFSRFGRRKTVRETIRELKQWLAKLNPEATppdqakpgNRHVRNRRDAYLEQIFEELLQFGAAY 356 Chromobacterium...
WP_002222491 281 PSWKNiqkPPIKYRSIFHDRSEFTVLARNNLWQMQLYLLGVKPLSN--------TMDIRAARLACCDEIIDILFNYVAEI 352 Yersinia pestis
WP_011927917 263 PVFRAr--QDIHFSPKLESIFFSKSLYYRVEDDLKILFGVIYCKEN--------NYEIRNMRKAAVHRIAHQILSIGETI 332 Dichelobacter n...
AAK02389     352 QKQp--AGWS--KDSQLEMCEKYWLDPKRVHLpdEEAFRAEYEKGEWVAEVERRFALWLNKRLQKrfphIAKDFDDVEYH 427 Pasteurella mul...
CAG76579     350 QNLp--VGWS--AESELKRAQQLWLDPYRAET--DTVFRREREAGDWQQAVAYEFGRWLNRRLKH----ENLIFGEVERR 419 Pectobacterium ...
AAQ59428     357 ANQl-pRGWTadSECRLPLEEQCWLDPRRADS--DEDFNRHFQFQDWPRQLTESFARWLNGQLGG----DRLQLAEAEFH 429 Chromobacterium...
WP_002222491 353 QNLdgtNGWSdaEDCKLKRSEQLWLDPTRAMD--DPVFKLEREKEDWKQEVSQDFGYWLNRWLQH----DELVFGYVEQR 426 Yersinia pestis
WP_011927917 333 CALr-pAGWS--KDYDLSSAQKYWLDPKRADLagEEKFKAERDAADWDKAIEKDFANWLQKVLEErfkkHRHEFTDIEHY 409 Dichelobacter n...
AAK02389     428 EWRRNIRRTLRYR 440 Pasteurella multocida subsp. multocida str. Pm70
CAG76579     420 EWSTAALFKRRMR 432 Pectobacterium atrosepticum SCRI1043
AAQ59428     430 HWRRELAHDIDWQ 442 Chromobacterium violaceum ATCC 12472
WP_002222491 427 EWS--SLFKQRLR 437 Yersinia pestis
WP_011927917 410 EWQREMKAVIKES 422 Dichelobacter nodosus
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