Conserved Protein Domain Family
HrpB4

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TIGR02560: HrpB4 
type III secretion protein HrpB4
This family of genes are always found in type III secretion operons in a limited number of species including Burkholderia, Xanthomonas and Ralstonia.
Statistics
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PSSM-Id: 131611
View PSSM: TIGR02560
Aligned: 4 rows
Threshold Bit Score: 182.777
Threshold Setting Gi: 52213062
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAH38871   6 SPSPHQRAAALLERYRRNFANAVCWAHPSWTCALLGIddsrcavwrAALERAGEATRIPCSQAIACAAGVARPSLDMLLE 85  Burkholderia pseudo...
CAH39100   6 PVASVEARAAWLAGYDANARRAADWVHASWHGALAPLv--------AAMHEHAPALRAACSLLLLRTLGGSAPTLGGFDS 77  Burkholderia pseudo...
AAP34341   2 DNTRIDNAARCVQRWTDALAHLAESLDAARVAHWLGP---------VAASGWAAAPVYRRMRVIQAWSGWSGLSPSALGL 72  Xanthomonas axonopo...
CAB58255   5 AMMPDQADTMILRILHAYQTRLQGLPRTLDSRAWSEC-------------AHGLSADAASWRDACDVLGLRSVALQTLLE 71  Ralstonia solanacearum
CAH38871  86 PALRrpargstvaaripnlalLDVLPHELGLAVLRMRALCLRSAEVRVVIDKRTRSRILAWTGIHPDHFMQDPRSIGGAD 165 Burkholderia pseudo...
CAH39100  78 RADR-----------------LAALPIADTLRLLRMRALLFRRTELRHWIDRASRERLAGWVGADGGRALAALCAQPDAR 140 Burkholderia pseudo...
AAP34341  73 HANQ-----------------LAVLMPALLAKVLIARALFSRGLAVRRCIERERLDWLEQCVGP---AVLEHVRQNASAG 132 Xanthomonas axonopo...
CAB58255  72 RAHR-----------------LAVLEAGDLRRVLAGRALYARRTALARCIDGAYLSRLNAAVGTALVSAMAARADWQPDA 134 Ralstonia solanacearum
CAH38871 166 AAwlkaavgmPPLASHDALTLSIEG--WMLLQCDTGAPPSSdTITLMRLALPrSLATPHWLAELAPRLDafggEHLFARL 243 Burkholderia pseudo...
CAH39100 141 RErerr-eplAPLAQLSADDVAWEG--WCLFERERVWSPAG-PMRIVRLALPrEPARAPWLERAAADADg---AMLLAHV 213 Burkholderia pseudo...
AAP34341 133 LP--------VPLLPRDADQAAWVGdgWRRMQADGVWPNPV-VAKLLALSLP--LGAAQVAALAADGAS----DAFLAAL 197 Xanthomonas axonopo...
CAB58255 135 GG---------PLPRPELQALAHAG--LVALVSDGWLTDPS-LIRLMRMTLG-AAPTGRVGPPALTPLS----ESFITAV 197 Ralstonia solanacearum
CAH38871 244 PRLLPEYAWLFG 255 Burkholderia pseudomallei K96243
CAH39100 214 PSLFPEWTWLFG 225 Burkholderia pseudomallei K96243
AAP34341 198 PTLMPEASCVSG 209 Xanthomonas axonopodis pv. glycines
CAB58255 198 PSIYPELSWLFG 209 Ralstonia solanacearum
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