Conserved Protein Domain Family
cas_TM1802

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TIGR02556: cas_TM1802 
CRISPR-associated protein, TM1802 family
This minor cas protein is found in CRISPR/cas regions of at least five prokaryotic genomes: Methanosarcina mazei, Sulfurihydrogenibium azorense, Thermotoga maritima, Carboxydothermus hydrogenoformans, and Dictyoglomus thermophilum, the first of which is archaeal while the rest are bacterial.
Statistics
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PSSM-Id: 274199
Aligned: 4 rows
Threshold Bit Score: 594.538
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM30260       1 MIETICDIGKIVRKTDGeidlvDLWQKEE------SGDYQLILDVNISDDSVR--INSRDFEK-----KVFRDGLLYSQG 67  Methanosarcina ...
WP_004082349   1 MLEKIYNLGKIGGDSFS-----NFAEEVP------SDEGIAIFLESNSEGLVFkdVVSIEKKPggknsKIFLYRKQRGNF 69  Thermotoga
WP_012547930   1 MLTNIKEIGKMVRTTSAedfvsNLVEYDEdlmvdeKENRKFLVIMDFDLESEKinLYRREVDRqvleeYLWVGNAKGNNP 80  Dictyoglomus th...
WP_012674258   1 MIEAVRNLGEFVLQQENkseidILLENPN------SGNYNKVIVLNFNKDFTFsnITTEDFKKdn--wRVYLYRRK-SSN 71  Sulfurihydrogen...
AAM30260      68 NWFVGA---VLKKESLKDSKIKDCLKFIDVPLD--RFDEVKSLIDLSLKDY--DGVNFVILFWKNGQK----P---IEIV 133 Methanosarcina ...
WP_004082349  70 SSSVSP---TMKFLDKSSGSRDPLERTFDVFLGffDHPKISHIKDVLERNK--EEIIDKLRNYDVKNRf---L---TISI 138 Thermotoga
WP_012547930  81 QDRLTTnnvSYLICSAGAGNGSSIVNLLNNLKGgtLKNLLEEVKNKFFMSLplEKVRYCLDLSKIGNGe---IidiKPPE 157 Dictyoglomus th...
WP_012674258  72 GPDFTP---TARVTEPKKTIENKIIKWFEEHRN--ENQILKKMYEELIKNK--NDILNEVEKRKSSKDegivL---TVKI 141 Sulfurihydrogen...
AAM30260     134 KN---KFLREIE--------------KNGLKKEKLS-----------------------------------GNCQICNEY 161 Methanosarcina ...
WP_004082349 139 DG---KFPAEVPeilq------afedKVTQKKTKGE-----------------------------------AKCFLCGKE 174 Thermotoga
WP_012547930 158 SSdekKYLKDIEnlwkkkf-leiieeKLGLKEKEISlftvtingmkpsefkdykeyienslieesfeesfeGTCHVCGER 236 Dictyoglomus th...
WP_012674258 142 DG---KYLYEIDnpnfkeifikdfykRLKDTKSK-N-----------------------------------ACCSLCGEV 182 Sulfurihydrogen...
AAM30260     162 TDTLYdS--IVYKCYTNDKEIFSN---------TDGISYGICKDCIFDVLYGRKHVNMFLSTWWGGSEILFLPHTYNE-- 228 Methanosarcina ...
WP_004082349 175 ANSRL-S--DVFKFATFDKPGFTPf-------lSKKHPIQICDDCRSVLEKARRAIDEKLSFSFFSNNRILWIIPSVP-- 242 Thermotoga
WP_012547930 237 SEITYdTtkFPVKFYITKLITFSSdfegkgvkkGFSKNFSLCRDCYKDIILGIKFIQNNLDTRLGNNDLWIIPGLFFNpl 316 Dictyoglomus th...
WP_012674258 183 KDEVFtTs-EIYKFYTLDKPGYIAggf---nksNAWKNFPVCESCYLKVDYGRKYIEEHLEFNFYGKTYYIIPNVILN-- 256 Sulfurihydrogen...
AAM30260     229 EVKEIFEFSKIGDLREGKNL-----LQQIR--ENECDVINEIG--KCGTDVDILFYSAQKSEWKITYNIKDVIPSRFSKI 299 Methanosarcina ...
WP_004082349 243 DQDILESVIEKIYEIKDTDK-----NSKFRsfARLEEEIEKVLseNERAVYDFVLIEKEQQAERIVLHVEEVSPTRVRRI 317 Thermotoga
WP_012547930 317 GKELKESWIRTSREFVKSTFnlqefLSFEEriQRNLDEYREFEeiADYGTVDLLFYERSKEAFKIKEYIKDVHLRRVEKI 396 Dictyoglomus th...
WP_012674258 257 TKEVMNEYLDILSEAKKRVS-----LKDKNptEDENYIINLLKdhKDGLCFYFLFLKKENSAERILLLIEDVLPSRISKI 331 Sulfurihydrogen...
AAM30260     300 AELEHKYQ----SKSG-ENLALWQVLAYLLGNSSKPSEIFNTneaknFLKNIFHGNKINRNLFFSRSMSKYKHDYFeG-- 372 Methanosarcina ...
WP_004082349 318 LEESKKIE----SQLKeDGFKVSVNFSVIHKFFEDLDRYFNS-----LFSAVFSEGTFDKKLLLTLFLSKIRSDFF-G-- 385 Thermotoga
WP_012547930 397 RNSIREVEnlgrEIFGeGENWFLGLEDIYFLIPIRRGKVSEYkkmldLYEDIFLEHRIDKDILIDYFVDLAKVYRFeKfs 476 Dictyoglomus th...
WP_012674258 332 FKVKKEVE----KIFNiENY----NFGFLTQFLGNYDKIFFE-----VIDKIFRGGKLDFQTLLQIFTKKIRDEFLsG-- 396 Sulfurihydrogen...
AAM30260     373 -Y---ENMFMLHRTYNF---LVDCGCLDKGwcfveqtSRGYSMVKYEdl---eEFFDFNKGFFDSNIKKAWFLLGRLYGK 442 Methanosarcina ...
WP_004082349 386 -N---DTLLSAREAFAT---YVYLRRLNVL-------KGGASVLKGE------DFFSRYPEFFDEPWKKAVFLEGVLANY 445 Thermotoga
WP_012547930 477 qY---NIKMVKNTDMGMslsILKTNLLLKLfeklnliTGGDRMPEFAddvldkDLQEYISKMQYSEEEAALFLLGYLIGE 553 Dictyoglomus th...
WP_012674258 397 -NsitNTVIYALMNVRF---FEELGLLESk-------EGKMEKTKFD------EIYEKVGKSLNTPAKRGIFLLGALTQM 459 Sulfurihydrogen...
AAM30260     443 MIQESKSYKGGEDKQSneshleknFFFGRKYDFKTFVYFSNQCSELMYKYGVQNKGYLKDLISTSKELMGAGDSKLSSDE 522 Methanosarcina ...
WP_004082349 446 LLYLQYVKRNSKAFTK--------KLKGLRLTKRDVEGLLPEIRAKIEAYGGMSESVAELFRETAEAFLEAGNWSASPDE 517 Thermotoga
WP_012547930 554 IGYEQIRGADLSAKKPil-----nKINFNGISAKNLINLANEVFEKLDQYKIRGYNEKTFSVMKSLMDKHIKSWKLSEQE 628 Dictyoglomus th...
WP_012674258 460 LLDIQWSERKTTPFFKn--------LKGLKMNEEDIKGLLPKVVNKLMEYERYDKGKQELAQEISKNLLSQEKFGLSINE 531 Sulfurihydrogen...
AAM30260     523 AKYIFFWGMQQWI 535 Methanosarcina mazei Go1
WP_004082349 518 ISFVFVSGLSLGK 530 Thermotoga
WP_012547930 629 NVYYILSGYAFNT 641 Dictyoglomus thermophilum
WP_012674258 532 INFYFVSGMALSE 544 Sulfurihydrogenibium azorense
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