Conserved Protein Domain Family
arch_flag_Nterm

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TIGR02537: arch_flag_Nterm 
archaeal flagellin N-terminal-like domain
This model describes a hydrophobic N-terminal sequence of archaeal flagellins and other archaeal proteins. The sequence is directly analogous to bacterial sequences recognized by TIGR02532, which has cleavage motif resembling G^FxxxE followed by strongly hydrophobic sequence. Such sequences are the recognized for cleavage and methylation, and include pilins and other pilus components and competence and type II secretion secretion proteins. In the present family, the E is not conversed and sequence differs enough that there is no overlap between this family and TIGR02532.
Statistics
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PSSM-Id: 274185
Aligned: 34 rows
Threshold Bit Score: 27.2584
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAC11980      12 DKAVSPIIATILLIAITIVLAATP 35  Thermoplasma acidophilum
BAB66466       8 TKGISSILGTVIVLAITIALGALL 31  Sulfolobus tokodaii str. 7
BAB66467       1 MKGISSIFSSLIVTMITISLAVPL 24  Sulfolobus tokodaii str. 7
Q9YAN8         4 RRGIVGIEAAIVLIAFVIVAAALA 27  Aeropyrum pernix K1
AAM30019       9 DKGFTGLEAAIVLIAFVVVAAVFS 32  Methanosarcina mazei Go1
BAB67631      16 RKGLAGLDTAIILIAFIITASVLA 39  Sulfolobus tokodaii str. 7
BAB67652      18 RRVINGIVTLLLLILFVFILIHAA 41  Sulfolobus tokodaii str. 7
CAC11408      11 RRAIYAIFTLLILIVFIFTLIHII 34  Thermoplasma acidophilum
WP_010902852   5 RRGQVGIGTLVVFMAMILVAAMAA 28  Halobacterium salinarum
WP_012716481   4 LKAISSIFSTLIVVMITLSLIVPL 27  Sulfolobus islandicus
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