Conserved Protein Domain Family
phg_TIGR02218

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TIGR02218: phg_TIGR02218 
phage conserved hypothetical protein BR0599
This model describes a family of proteins found almost exclusively in phage or in prophage regions of bacterial genomes, including the phage-like Rhodobacter capsulatus gene transfer agent, which packages DNA. An apparent exception is Wolbachia pipientis wMel, a bacterial endosymbiont of the fruit fly, which has several candidate phage-related genes physically separate from obvious prophage regions. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 274038
Aligned: 6 rows
Threshold Bit Score: 266.324
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAQ94488       3 LYQFSRGAIRWSYNSSDRDITYQNQIFRTVPGGITDNGIICSGDPQSDQFVITAPADLDVALLYKTRSPSGAVDLVVYDM 82  Pseudomonas pha...
AAK24740      17 WILTRADGTRLGFTDHDQDLVVDGVTCRAGGGWSPGAADSAVGYAPGQSAVLGVLDEAGIAPADLAAGLYDGARVEALRV 96  Caulobacter cre...
AAS14439      20 WKLKLAGGEVMGFTDYDEDLNIDNILYKSSSGFTASSIILNSDLKTDNLEIEGILNSADIKEEDVLSGKYDFANIEIFLV 99  Wolbachia endos...
WP_004683305  23 WLIRRLDGAVLGFTDHDAPLTVDQVICDPLTGLNSSEASTALGLGIAGGEVEGVLSSTQISDEDIEQGRYDGATIEAFLV 102 Brucella
WP_011047974  23 WAILRKDGVRFGFTDHDCMLEFDGFTFKADSGLTAAALEQSTGLSVDNSEALGALSDAAVREEDIEAGRFDGAEVLSWLV 102 Ruegeria pomeroyi
WP_010971293  23 WRVTLKDGVVMGFTDHDETLSFGGTSYLAASGFSASDSDSETGLGASAGEVAGGFSSEAIAEDDLAAGRFDGAKVELFLV 102 Agrobacterium f...
AAQ94488      83 HYGDAEA--AVSWVGQIGDVDWPTVDSCRITCVSEDELMDQPGLidTYCRTCTAVVGDHRCkvnl--vpyrVtltpqs-i 157 Pseudomonas pha...
AAK24740      97 DWSAPSRr-VSLWTATIASVTREGEAFTATLAGPLAALERVAGR--TFTRLCDARLGDVRC----------G-------- 155 Caulobacter cre...
AAS14439     100 NYKDLTQgtMNLHSGIFGKVTLSSGRFIVEIRGLSAKLERSIAE--LYSPACRAQFCDDKCkadt--kkfsKistitkvi 175 Wolbachia endos...
WP_004683305 103 NWDEPDQh-MLLRRWAAGKISRSGSRFVMELKGVAAAFDAVRGR--RILRHCDAMLGDKRCgidtgdprffAqgtvlv-a 178 Brucella
WP_011047974 103 NWAEPEQr-WLQFRGSIGELRRGGGAFQAELRGLTDALNQPLGR--VFQKPCTAVLGDGGCrfdldqpgyrAeiaveqve 179 Ruegeria pomeroyi
WP_010971293 103 NWQAPDEh-VLLSLREIGEVTRAGGAFRAELRSIAHRLGQPQGR--SYGRRCDAALGDGRCgvdl--trftGhgsvaavd 177 Agrobacterium f...
AAQ94488     158 sgwvISSgvvagyADgwftggyvewqVdgdnydsryierhagpdl-----yilggtegipaggqlrvyPGCDGLAQTCDD 232 Pseudomonas pha...
AAK24740     156 ----ITP------AP-----------G-----------------------------------------AACDKRWATCVG 173 Caulobacter cre...
AAS14439     176 derrFEDtnl-teSDeyykhgvvkffGsiafegvvkeyknkvvtl------ftsppyqifagdkysilAGCDKTFPTCRS 248 Wolbachia endos...
WP_004683305 179 egtrLDVagvdgfAAgwfsegrlawtSganrgravrvvghagaslq----lgepmilpvaagdafrlvCGCDKSFATCKA 254 Brucella
WP_011047974 180 dgrvFRWtdlsgfEPgwfqrgrldvtGgaaaglwaliksdkvsaagreielwepiraalrpgdglrltAGCDKRMETCRL 259 Ruegeria pomeroyi
WP_010971293 178 vsgkLRVsgldafAEgffsrgklgflTgslagkafdldgherrdggvllsfwltpdrmpspgdrfsvtAGCDKSFATCKA 257 Agrobacterium f...
AAQ94488     233 KFSNLPNFRGFNAMQG----------KSPFDGDQV 257 Pseudomonas phage D3112
AAK24740     174 VFGNGVNFRGFPTSPGedfvtlypveGERNDGGRR 208 Caulobacter crescentus CB15
AAS14439     249 KFNNTVNFRGEPYIPgfyiv--------------- 268 Wolbachia endosymbiont of Drosophila melanogaster
WP_004683305 255 KFANGVNFRGFPHLPGndaayayvnsTNDYDGGVL 289 Brucella
WP_011047974 260 KFNNLLNFQGFPDLPRedwvmatpkrTGANSGGSL 294 Ruegeria pomeroyi
WP_010971293 258 KFGNHLNFRGFPHLPGadfaysyasgGQSHDGGVL 292 Agrobacterium fabrum
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