Conserved Protein Domain Family
rfaE_dom_I

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TIGR02198: rfaE_dom_I 
rfaE bifunctional protein, domain I
RfaE is a protein involved in the biosynthesis of ADP-L-glycero-D-manno-heptose, a precursor for LPS inner core biosynthesis. RfaE is a bifunctional protein in E. coli, and separate proteins in some other genome. The longer, N-terminal domain I (this family) is suggested to act in D-glycero-D-manno-heptose 1-phosphate biosynthesis, while domain II (TIGR02199) adds ADP to yield ADP-D-glycero-D-manno-heptose. [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Statistics
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PSSM-Id: 274029
Aligned: 21 rows
Threshold Bit Score: 383.892
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAE78678             20 QIPFLKGKKILIIGDVGLDEYVMGQVRRISPEAPVPVLEVEEEDMRLGLAANVAQNVASLGGEAMLVSVVGDDTGANLLR 99  Bdellovi...
CAD83588              4 ILPDFLKSNVLVVGDIMLDRYWYGSTNKISFESPVPVVEINNVIDIPGGAANVAMNIASLGGRVRLIGLVGVDDAAQRLK 83  Candidat...
P57168                4 KLINFNNSLVLVVGDLILDCYWYSKNHYMLSEQLTPIVPINKIKEQPGGAANVAKNIAEIGGYTKIVGFIGMDNEGLILK 83  Buchnera...
AAN56728              4 SLPAFEKAKVLVVGDVMLDRYWVGPTGRISPEAPVPVVKINQVEDRPGGAANVALNIATLGGQVQLAGLVGEDDTAKALT 83  Shewanel...
AAO58411              4 SMPRFDQAPVLVVGDVMLDRYWHGGTSRISPEAPVPVVKVDQIEDRPGGAANVALNIAALGAPASLVGVTGDDEAAESLT 83  Pseudomo...
AAP96033              5 YSLKFNQAKVLVLGDVMLDRYWFGATNRISPEAPVPVVKVKDMEERAGGAANVAMNIASLNATVALHGLVGHDDAGCVLD 84  Haemophi...
CAD14616             11 ASEQIHAARILVVGDMMLDRYWFGDVERISPEAPVPVVQIKRSDERLGGAANVARNVAALGAQAGMLGVIGEDEPGRTIE 90  Ralstoni...
CAE33955              5 PAERIARARVLVVGDVMLDRYWFGEVDRISPEAPVPVVRVARREDRLGGAANVARNVAALGAQVTLIGVVGADEVGHRIE 84  Bordetel...
BAC09325             20 LLQSFSSARVLVVGDLTLDEFLTGQVERLSREAPVLILRHEFTRQVPGGGANAIYNLAKLGAQVQAVGLVGTDPQGEALC 99  Thermosy...
lhbprmlnih:CBU_1655  27 DISLYEKARIVVYGDIMLDRYWYGQASRISPEAPIPVVNVDQIEARPGGAANVALNVAALGASVELMGVVGDDQESRELE 106 Coxiella...
CAE78678            100 ELFAKSGVSwDYMIVDKARPTTRKTRVMAK-----HHHLVRVDYELRkyLSAEAEARLIETVEKNVAKADCVVIEDYAKG 174 Bdellovi...
CAD83588             84 KRLTECKIK-WNFISVDTHPTIMKLRVMSR-----NQQMIRLDFEKK--FNNVNTDQLMNVIKVYLPQYKVLALSDYAKG 155 Candidat...
P57168               84 KLMDHIRID-SDLISIKNNKTITKIRILSE-----KKQLIRVDFQEK--YISNKNNLLHQKIIDSISSFKILVLSDYAKG 155 Buchnera...
AAN56728             84 LGVQALGVE-PQWLNIADKPTITKLRVLSR-----NQQLIRLDFEES--FDKQDSARLLKQSEALLDSVDVVVLSDYAKG 155 Shewanel...
AAO58411             84 NSLKAAGVV-ARFQRIADQPTIVKLRVMSR-----HQQLLRIDFEEP--FN-TDPLALSAEVYSLLDGIKVLVLSDYGKG 154 Pseudomo...
AAP96033             85 MLLKNHHIQ-NHCITLDSHPTITKLRILSR-----HQQLLRLDFEES--FHNVESSPLLAKLQQQITGYGALILSDYGKG 156 Haemophi...
CAD14616             91 ALLDASHVR-GHLHRDPSVNTTIKLRVLAR-----QQQLIRVDFENP--PTHEVLISVLDRFGTLLPEHDVVVLSDYGKG 162 Ralstoni...
CAE33955             85 RMAAEEGVR-TDLVSDTEHPTTLKMRVLGR-----QQQLLRVDFEQH--PEPAALDGISAAVARQLAQHDIVVLSDYAKG 156 Bordetel...
BAC09325            100 SIFQEAGIDtRGILKDSDRPTVTKTRISGHarqsvTQQIVRVDRKSDdlPSPALQEALATFIREQLGTADAVVCSDYGDG 179 Thermosy...
lhbprmlnih:CBU_1655 107 TLLNKKSIN-CHFHRLNDHPTVTKLRVLGQ-----NQQLLRLDFEKT--LKHYEDKGLLQRYQHSLSHAQAVILSDYAKG 178 Coxiella...
CAE78678            175 VISRnvVEKVAAICKKHGKKLMVDPHRNnHGSFYQGVDLIKPNYDEAVVLTGmdfddLRDNPNKVVDVARALQKLTGAKD 254 Bdellovi...
CAD83588            156 TLDC--VEEIIKIARFFKIPIIIDPKGV-QFSKYKGATILTPNMSEFEAIVG-----FCSNEEIIIKRAKELMNEYDLLA 227 Candidat...
P57168              156 TLAN--IQNIIDLAKKMSIPILIDPKGI-DFKKYSGASLLTPNLFEFEKIVG-----KCYRENEILQRGIKLLSELQLSA 227 Buchnera...
AAN56728            156 AIDN--PRDFIALARSKGVKVLVDPKGS-DFSRYHGASLITPNMSEFEAVVG-----AVTSEADLLEKARGLLNKYQFDA 227 Shewanel...
AAO58411            155 ALKN--HQALIQAARKRGIPVLADPKGK-DFAIYRGASLITPNLSEFEAIVG-----HCEDEAQLVTKGAQLMQELDLGA 226 Pseudomo...
AAP96033            157 TLAA--VQQMIQIARQAKVPVLIDPKGT-DFERYRGATLLTPNMAEFEAVVG-----ACLNDNDIVSKGLKLINDLELSA 228 Haemophi...
CAD14616            163 GLTH--VAKMIEAARQAGRRVLVDPKGD-DYSRYKGATMITPNRAEMRQVVG-----SWKTEADLTIRAQNLRRELQLEA 234 Ralstoni...
CAE33955            157 VLDR--VESIIAAAVGHSLPVLVDPKGD-HYERYRGATLVTPNRAEMREAVG-----RWKTEDELAERAQRLRLDLDLEA 228 Bordetel...
BAC09325            180 VFT----PPVIAAALEHQR-TIVDSQRD--LARYRGAFLFTPNLPEAEAAVGy----pIRTEAEVLQAGEDLLNLTGAKY 248 Thermosy...
lhbprmlnih:CBU_1655 179 ALFN--VTAPIQRAREKGLPVLVDPKSV-DFSRYAGATLLTPNLKEFEAVVG-----HCRTDQELEFKARALIHQYRFEA 250 Coxiella...
CAE78678            255 VVLTRGKDGMTIVS-GDEITEVPTYAR-KVFDVTGAGDTVIAALSLGLVSGLSLVHSCMLANYAAGVVVGKVGCVPCEIP 332 Bdellovi...
CAD83588            228 LLITRSDQGMTLLQrSLDPLYFSAQSK-EVYDVTGAGDTVVGVLSAALSLGENLEKSCFLANAAAGSVVEKSGTSTVNVA 306 Candidat...
P57168              228 LLVTRSKNGMTLFQkEKKPIHFPAASK-IASDVTGAGDTVIAIIAASLATGYSLEEACFYANIGASIVIQKIGTETLNIN 306 Buchnera...
AAN56728            228 ILVTRSEKGMTLVTaNAPELHIPTVAR-EVYDVTGAGDTVISALATSLAAGAELAQACAIANTAAGVVVGKLGTSTVSRI 306 Shewanel...
AAO58411            227 LLVTRGEHGMTLLRpDQQALHLPARAR-EVFDVTGAGDTVISTLAAAIAAGEELPHAVALANLAAGIVVGKLGTAAISAP 305 Pseudomo...
AAP96033            229 LLVTRSEKGMTLLRpNHPPFHLPTQAK-EVYDVTGAGDTVISILATAIADGRPYEEACYLANAAAGIVVGKLGTSTVNAT 307 Haemophi...
CAD14616            235 LLLTRSEEGMTLYT-EHEVLHVSAQAR-EVYDVSGAGDTVIATLATLLGAGANIKEAVQYANRAGGIVVGKLGTAVVTYA 312 Ralstoni...
CAE33955            229 LLVTRSEQGMTLFT-DAGRDHADAAAH-EVYDVSGAGDTVLATLAVMRAVGLSWGDAMRWANRAGGIVVGKLGTSVVTAA 306 Bordetel...
BAC09325            249 VLITRGDAGMSLFSrEAAPYHLPAFNRtDVFDVTGAGDTVVAALTLALVAGASLWEAAVLGNLAASIVVRQFGTATTSTA 328 Thermosy...
lhbprmlnih:CBU_1655 251 ILITRGKQGMMLIQkEGAAINLVAHAR-EVYDVTGAGDTVIAVMAASLAAGGDFYEAAQLANLAAGLVVRKLGAATVTVP 329 Coxiella...
CAE78678            333 ELKEYIQ 339 Bdellovibrio bacteriovorus HD100
CAD83588            307 EINNVVQ 313 Candidatus Blochmannia floridanus
P57168              307 ELNSVLN 313 Buchnera aphidicola str. APS (Acyrthosiphon pisum)
AAN56728            307 ELIEALA 313 Shewanella oneidensis MR-1
AAO58411            306 ELRRAIQ 312 Pseudomonas syringae pv. tomato str. DC3000
AAP96033            308 ELENAIH 314 Haemophilus ducreyi 35000HP
CAD14616            313 ELFNQAS 319 Ralstonia solanacearum GMI1000
CAE33955            307 ELAGEST 313 Bordetella bronchiseptica RB50
BAC09325            329 EMAAALR 335 Thermosynechococcus elongatus BP-1
lhbprmlnih:CBU_1655 330 ELRRALH 336 Coxiella burnetii RSA 493
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