2X6T


Conserved Protein Domain Family
heptose_epim

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TIGR02197: heptose_epim 
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ADP-L-glycero-D-manno-heptose-6-epimerase
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). [Cell envelope, Biosynthesis and degradation of surface polysaccharides and lipopolysaccharides]
Statistics
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PSSM-Id: 274028
Aligned: 17 rows
Threshold Bit Score: 396.266
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2X6T_A        49 IIVTGGAGFIGSNIVKALNDKG-ITDILVVDNLKD------------GT--KFVNLVDLNIADYMDKEDFLIQIMAG--E 111 Escherichia coli
BAB49664       2 IIVTGGAGMIGSNIVAALNAEG-HDDILVVDDLTD------------GH--KIANLADLSIADYLDKDDFLTRIEAG--A 64  Mesorhizobium l...
CAD83282       2 IIVTGGAGFIGRNLIRRLNKIQ-RTDILVVDNLRN------------GK--KYKNLVGLHISDYIDKHCFIKRLLNNsnY 66  Candidatus Bloc...
AAL93818       2 IIVTGGAGMIGSAFVWKLNEMG-IKDILIVDKLRK------------ED--KWLNIRKREYYDWIDKDNLKEWLVCKe-N 65  Fusobacterium n...
CAE78327       2 IIVTGANGFIGSVMVWELNQKG-LTDIIAVDSVGL------------SE--RNL-LRKQKITKFLLKDDLWPFLETEe-A 64  Bdellovibrio ba...
tigr:CT1258    2 IIITGGAGFIGSAMLWELNRNG-TDEVLIVDDLGR------------ASegRWLNLRGLRYTDFIHKDDLPDLLEHDr-- 66  Chlorobium tepi...
AAK23411       6 VLVTGGAGFIGSNIVARLCEDP-ALDVVVCDRLRD------------AAsgKWRNIAKHAIADFVAPEQLFDWLAKRg-- 70  Caulobacter cre...
BAC51193       2 LLVTGGAGFIGSNVVAALNDAG-RSDVAVCDFLG--------------TdgKWRNLAKRQLVDIAPPAELPDWLNg---- 62  Bradyrhizobium ...
AAP78130      13 ILITGGAGFIGSNLAFYFQKHHpLAQVYVFDKFRNdetfpsgnpttlGHfkNLIGFKDKVIVGDINNPSDLEKLKS---- 88  Helicobacter he...
WP_010880173   3 FLITGGAGFIGSNLAFALQERYpEAKIYVLDNFSS------------GHfkNLIGFKGQVITGDISDPSLWDYVRKN--- 67  Aquifex aeolicus
2X6T_A       112 eFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLEREIPFLYASSAATYGgRTSDFIESREYE-----KPLNV 186 Escherichia coli
BAB49664      65 -LGRIEAVFHQGACSTTTEWNGKFMMEVNFAYSKRLLHACQAPRVPFLYASSASVYG-GGSEFREEPALE-----RPLNV 137 Mesorhizobium l...
CAD83282      67 -LKNIEVIFHEGACSNTYEWNGRYLMNNNYQYSKSLLNYSVENSIPFIYASSASVYGkNIYSSNTFDNNE-----NPLNI 140 Candidatus Bloc...
AAL93818      66 -ADNIEAVIHMGACSATTETDADFLMDNNFGYTKFLWNFCAEKNIKYIYASSAATYGmGELGYNDDVSPEelqklMPLNK 144 Fusobacterium n...
CAE78327      65 -KKQVTWIIHMGACSSTTETNKEFLWENNTYYTQRIFEWCAEHGKSMIYASSAATYGaGELGFDDTTDPEk---lRPLNL 140 Bdellovibrio ba...
tigr:CT1258   67 -LPKIDAVIHMGAISSTTEQDANLLLRNNYEYSKMLASWCAKKGVRFIYASSAATFGdGSEGYSDGIEVLdr--lRPLNM 143 Chlorobium tepi...
AAK23411      71 --GEVELVVHMGAVSSTTEVDADKIVQSNFVLSRDLWDWCAQHGKRLIYASSAATYGdGALGFDGKDDLAslqalRPLNA 148 Caulobacter cre...
BAC51193      63 --RRLDAVIHLGAISATTATDGDLVFETNFRLSMRLLDWCTANAVPLIYASSAATYGdGEAGFDDDASLPalkklRPMNL 140 Bradyrhizobium ...
AAP78130      89 --YDFDIIFHQAAISDTTVLNQELVMKTNHESFLRLLDIATQSQAMVIYASSAGTYGnSPAPNSVGSGEM------PENI 160 Helicobacter he...
WP_010880173  68 --FHFDVIFHEAAITDTTVEDQYFMMKTNADSFRYILDLAVEWNAKVIYASSAGVYGnSPPPMREDKGLE------PENI 139 Aquifex aeolicus
2X6T_A       187 FGYSKFLFDEYVR-QILP-EANS-QIVGFRYFNVYGPREGHKGSMASVAFHLNTQLNNGESPKLFEGS-ENFK-----RD 257 Escherichia coli
BAB49664     138 YAYSKKLFDDYVRrTVFD-TDHS-QVAGLRYFNVYGPREAHKGAMASVAFHLFNQVERGENPRLFGAY-DGFGpgeqsRD 214 Mesorhizobium l...
CAD83282     141 YGYSKFLFDQYVR-SVLT-KVSS-QVCGLRYFNVYGPYENHKGAMASIIFNIYQKIIHRKIPVLFIGS-RDFK-----RD 211 Candidatus Bloc...
AAL93818     145 YGYSKKFFDDWAFkQK----NQPkQWNGLKFFNVYGPQEYHKGRMASMVFHTYNQYKENGYVKLFKSYkEGFKdgeqlRD 220 Fusobacterium n...
CAE78327     141 YGESKVLFDRWAVkQT----KTPpHWYGLKFFNVFGPNEYHKGAMSSVAFKAYNQIKDTGALGLFKSAdPNYKdgefmRD 216 Bdellovibrio ba...
tigr:CT1258  144 YGYSKHLFDCWALrN-----GILeKAAGLKFFNVYGPNEYHKEDMTSVVFKAFHQIGDNGKVRLFRSHnPQYAdgeqlRD 218 Chlorobium tepi...
AAK23411     149 YGWSKALFDIYAVrEAQRg-RAPaQWAGLKFFNVYGPNEDHKGGMKSVAAQIWPRIAAGEGVKLFKSHhPDYEdggqlRD 227 Caulobacter cre...
BAC51193     141 YGWSKHMFDLAVAeRVARgEKLPpQWAGLKFFNVFGPNEYHKGSMMSVLARRFDDVKAGRVVQLFKSHrEGIAdgdqrRD 220 Bradyrhizobium ...
AAP78130     161 YGYSKLCMDESVRrILt--SNPSyPIIGLRYFNVYGEREFYKGKTASMILQLGLQALKHKKVRLFKYG-EQK------RD 231 Helicobacter he...
WP_010880173 140 YGFSKLMMDHIAMdYMER--YPEmNIVGLRYFNVYGPREDYKGKTASMIYQLAVKMIKGERPRLFKWge-------qrRD 210 Aquifex aeolicus
2X6T_A       258 FVYVGDVADVNLWFLEN-GVSGIFNLGTGRAESFQAVADATLAYHK------KGQ-IEYIPFPDKLKGRYQAFTQADLTN 329 Escherichia coli
BAB49664     215 FIHVGDVADVNLWLWKR-GSSGIFNCGTGRAQPFRAIAETVIDTLg------KGE-IEFIPFPDHLKGSYQSFTQADMSR 286 Mesorhizobium l...
CAD83282     212 FIYIDDVVNINIWMWVN-KISGIFDCGTGVSESFTLLADIVLKFLn------YDS-IQYVPMPYKIRQHYQTFTKANISY 283 Candidatus Bloc...
AAL93818     221 FVYVKDVVDIMYFMLVNdVKSGIYNIGTGKARSFMDLSMATMRAAShndnldKNEvVKLIEMPEDLQGRYQYFTEAKINK 300 Fusobacterium n...
CAE78327     217 FVYVKDVTGWMAELMEKkPTNGVYNMGFGKPRTWLDLAGGVFKAMG------KDMkINWLEMPENIRGQYQYFTEAKTDK 290 Bdellovibrio ba...
tigr:CT1258  219 FVYVKDCTKIMQWLLETpSATGLFNIGTGQARSFRDLVIATFTAMD------RPVsIEFIDMPETIRDKYQYYTCADSAH 292 Chlorobium tepi...
AAK23411     228 FVYVRDVVDVVGWLAKSpAVNGVFNLGSGQARSFRDLAVATFEAAG------RAPdITYIDMPEVLRGKYQYYTQADMSR 301 Caulobacter cre...
BAC51193     221 FIYVDDVVRVIMWLLATpSVSGLFNVGTGKARSFKDLMLAAYAALG------ARPnIEYIDMPEQIRNSYQYFTQSEVDR 294 Bradyrhizobium ...
AAP78130     232 FVYIKDVIQANIKAIESm-QSGIYNVGSGEARSFNDIIACLKDGIGdf-------eVEYFDNPYA---FFQTHTQADIAS 300 Helicobacter he...
WP_010880173 211 FVYIKDVIKANLLALEKn-VSGIFNVGTGRARSFNEIVSILNKELG------TNYeIEYFDCPYD---FYQKFTEADLTK 280 Aquifex aeolicus
2X6T_A       330 LRAAGYDKPFKTVAEGVTEYMAWLNR 355 Escherichia coli
BAB49664     287 LRAAGYNGQFRTVETGVRDYVEWLKA 312 Mesorhizobium loti MAFF303099
CAD83282     284 LRNIGYDFSFIKLSEGIHRYLNWLIH 309 Candidatus Blochmannia floridanus
AAL93818     301 LREIGYTKEMHSLEEGVKDYVQNYLA 326 Fusobacterium nucleatum subsp. nucleatum ATCC 25586
CAE78327     291 WLAAGMSPAKWPLEKAVADYIQNYLS 316 Bdellovibrio bacteriovorus HD100
tigr:CT1258  293 LRQAGYTGQMTPLEEGVRDYVQNYLS 318 Chlorobium tepidum TLS
AAK23411     302 LRAAGYNAPMTALEDGVADYVAGYLN 327 Caulobacter crescentus CB15
BAC51193     295 LCRAGYNGGFTTLEDAVKAYVGDYLD 320 Bradyrhizobium diazoefficiens USDA 110
AAP78130     301 TKEHLSYMPRFSLEEGIKTYLKEIKA 326 Helicobacter hepaticus ATCC 51449
WP_010880173 281 IREALGYEPEYSLEEGIKDYLPYIIK 306 Aquifex aeolicus
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