Conserved Protein Domain Family
PorB_KorB

?
TIGR02177: PorB_KorB 
2-oxoacid:acceptor oxidoreductase, beta subunit, pyruvate/2-ketoisovalerate family
A number of anaerobic and microaerophilic species lack pyruvate dehydrogenase and have instead a four subunit, oxygen-sensitive pyruvate oxidoreductase, with either ferredoxins or flavodoxins used as the acceptor. Several related four-subunit enzymes may exist in the same species. This model describes a subfamily of beta subunits, representing mostly pyruvate and 2-ketoisovalerate specific enzymes.
Statistics
?
PSSM-Id: 274015
Aligned: 7 rows
Threshold Bit Score: 441.125
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CAC11903      13 VDWCPGCGDFGILTALTSALQELNLGPHDVAVISGIGCSGKTPHYVNAAGAHTLHGRAIPVAVGVKLTNPKLKVIVTGGD 92  Thermoplasma ac...
AAL63562      17 PIWCPGCGDYGILEALRRALAELSLPNEQVVVVSGIGCSSQLPHFMKTYGIHGLHGRAVAIASGIKIANPKLKVVVVGGD 96  Pyrobaculum aer...
WP_010866394  14 VQWCPGCGDFGILNSIYRAVSELGIDPENLAVVGGIGCSGRTTYYVKGSNFHALHGRAIPVATGVKLANPHLNVIVAGGD 93  Aeropyrum pernix
WP_010965753  11 TAWCQGCGNFNILSSLKESLTELKLNPHQVLIVGGIGQAAKTPQYINTNGFCGLHGRALPPAVGAKIANKDLTVIIDTGD 90  Clostridium ace...
WP_011173963  15 PDWCPGCGDYGILSALQMALFELRLDPSRTVVFSGIGCSAKTPHYLNVYGVHTLHGRVLPIAQGAKLANPHLTVVAVGGD 94  Thermus thermop...
WP_010866811  15 SDWCPGCGDFGILAAMQKAFAELNLDPAQTVVVSGIGCSSKTPHFINVNGVHTIHGRGIAFATGIKLANPQLKVIVNGGD 94  Aeropyrum pernix
WP_004080204  11 IAWCPGCGNFGIRTALMKALEELNVDPRQVVIVSGIGQAAKMPQYVGVNMFNGLHGRALPVATAIKTTNPNLLVIAESGD 90  Thermotoga
CAC11903      93 GDLMSIGAGHLVAEGRRNSGITVLMYDNAVYGLTKGQAAPTLKLGVQTKSLARPNIYDAINPIMLAISTGYSFVARGFSF 172 Thermoplasma ac...
AAL63562      97 GDGYGIGLNHMIHAARRNIGITYIVSNNQVYGLTTGQMSPTTLKGVKTKTTPYGSIDEPVNPLALALAAGATYVARGFSG 176 Pyrobaculum aer...
WP_010866394  94 GDLMGIGGGHFVALGRRNLNITVLLFDNAVYGLTKGQAAPTLPAWVKTKALSMPNIHDNINPVLLAFAAGYTFIARGYAY 173 Aeropyrum pernix
WP_010965753  91 GDAYGEGGNHFIHNIRRNVDITEFVHDNQIYGLTKGQASPTTDIGHVTEVQPYGSNNVPLNPVLLAITLGAGFVARAFSG 170 Clostridium ace...
WP_011173963  95 GDGLGIGAGHFVAAGRRNVDMLYILYDNEVYGLTKGQAGPTLGLGEKPKSLPRPNPQGKVNPLLLAFASGYTWIARGYAY 174 Thermus thermop...
WP_010866811  95 GDLLGIGVAHFVALGRRNLDVTVLIHNNKVYGLTKGQASPTLRRGEKVKSLPVPNLQDAVNPIALAIASGYTFVARAYSL 174 Aeropyrum pernix
WP_004080204  91 GCMYGEGGNHFIHTIRRNPDIVNIVHDNQVYGLTKGQASPTSLKGFKTPVQVDGVILEPFNPLAVAIALDASFVARTFIG 170 Thermotoga
CAC11903     173 EIAHLKNIIKQAVMFPGSSFIDILQPCPTYNNINTMDWYKKRVYKLD-DDkSWDPVVTendpk--aeekyNRAIEKSFEW 249 Thermoplasma ac...
AAL63562     177 DVAHLAKLIKEALSHRGFALVDVLSPCVTFNKVNTYDWFRARVYKLE-ES-GHDPRDY------------FQAYKKALEW 242 Pyrobaculum aer...
WP_010866394 174 HTQQLKELIKTAVRHRGAALVDILQPCPTYNNIMTNKWYEERIYYVDqEE-GYDPIIRtpeef---qkkaPAIAAKLMEF 249 Aeropyrum pernix
WP_010965753 171 DKNHLKEIMKQAINYKGYSLVDILQPCVSFNKINTFKWYMDRVYKLD-NN--YDPSNK------------IKAMEKAMEW 235 Clostridium ace...
WP_011173963 175 DVKGLKELIKEGIAHRGLAFLHVLQPCPTYNDLHTKEWFAPRLYRLE-EE-GYDPLVPpglppealearmARFQQKALEW 252 Thermus thermop...
WP_010866811 175 WVDHLKEILKAAINHKGSAVIDVLQPCVTYNDIYTAEFYKDRLYKLE-DDpSWDPIVRdpsed---eekkAAAIKKAEEW 250 Aeropyrum pernix
WP_004080204 171 DIEFTKDILKEAMKHKGYALVDILQPCVTFNKLNTYEWYRENTYYLK-D---HDPTDRe------------LAFKRAIET 234 Thermotoga
CAC11903     250 G-----DRIPIGVFYVNKKIPPFTERLKQYVDNYen-vPPAAQDVKSpdgrPIVDp---FETFKD 305 Thermoplasma acidophilum
AAL63562     243 PtidpvGKIPIGLFYKTEEKPAYEEEMLKILGGR----APIEAELQP----PLEKv---LELLER 296 Pyrobaculum aerophilum str. IM2
WP_010866394 250 G-----DRIPLGILYWNQTRESFEERLEKIMPGYms-aPPATRRIELeg-kPFLHp---FDIFKD 304 Aeropyrum pernix
WP_010965753 236 G-----DKIPIGILYKDENKKEFSENLEFLKKEK----PLVYSEIK------IDKi---KNFLEE 282 Clostridium acetobutylicum
WP_011173963 253 G-----ERIPVGVFWKAEL-PTFEARLKAYLPRYpe-aYPARGPETP------LDl---EGLLQE 301 Thermus thermophilus
WP_010866811 251 G-----TRIPVGVFYVNPLKDTYEERLAQRNPSYsidnPPALQPISRedgsPIVGpdefRKIFKR 310 Aeropyrum pernix
WP_004080204 235 ------EKLPLGIFYVNKNKETFEE-LARKGDRT----PLYEYEVN------FEKl---KELIES 279 Thermotoga
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap