Conserved Protein Domain Family
Fibro_Slime

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TIGR02148: Fibro_Slime 
fibro-slime domain
This model represents a conserved region of about 90 amino acids, shared in at least 4 distinct large putative proteins from the slime mold Dictyostelium discoideum and 10 proteins from the rumen bacterium Fibrobacter succinogenes, and in no other species so far. We propose here the name fibro-slime domain
Statistics
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PSSM-Id: 162730
View PSSM: TIGR02148
Aligned: 12 rows
Threshold Bit Score: 150.933
Threshold Setting Gi: 506212407
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAB47241      158 YHNYHFCFQFDNRFLFKGNETFKFTGDDDVWVFINKQLVVDLGGTHPAASSSVDLSTL--G-------LTVGKVYPFNFF 228  Dictyostelium...
AAB07590      153 YHNFHFCLKLNTKFTYQGIEDFYFIGDDDVWVFINNKLVVDLGGLHSRETGSVDVTKL--G-------LTKGSTYDFDFF 223  Dictyostelium...
AAO52466      162 YHNFHFCVKMNSRFTYNGGEVFNFKGDDDLWVYIDDKLVVDVGGIHPAQDGSVNLDTL--G-------LIKNKVYPLDLF 232  Dictyostelium...
AAO52378      150 YHNFHYCLKINSVFFYQGTETFKFEGDDDVWVFIDKKLVLDLGGLHPARRGTVDLTKL--G-------LQVNKTYSFDFF 220  Dictyostelium...
WP_014547084  350 KHNFGFTMKIQAAFEYVPGQYFEFFGDDDVWVFINNHLVVDLGGVHTQILGAVDLDTL--G-------LIEGENYPFHIF 420  Fibrobacter s...
WP_015731987  437 KHNYGFTMKIQASFEYIPGQYFEFNGDDDVWVFINNRLVVDIGGQHTKVFGAVDLDTL--G-------LQEGVNYPFHIF 507  Fibrobacter s...
WP_014546032  432 YHNYGFTMKIQAEFVYVKGQYFEFNGDDDVWVFINNKLVVDIGGQHKKVRKAVNLDTL--N-------LTPGETYPFHIF 502  Fibrobacter s...
WP_015732318  298 KHNFGYTAKIQATFEYVPGQYFDFYGDDDVWVFIDNRLAVDIGGQHAQVAGAVDLDTI--Gqnt-gnkLVPGKTYDFHIF 374  Fibrobacter s...
WP_014546164  665 KHNYSFAMKVSAQFRYVKGQYFEFRGDDDVWVFINNRLVVDIGGCHSPVEGGVNLDTI--GqndpslkLVEGREYPFHIF 742  Fibrobacter s...
WP_014546163  679 KHNYGYTMAVSASFKYVKGQYFEFRGDDDVWVYVNNRLVVDIGGVHEKVEGAVNLDTI--GqndptlaLKEGREYPFHIF 756  Fibrobacter s...
WP_014546637  560 GRNQHFCFESHANFRFKPGLKFNFRGDDDIWVFIDNKLAVDLGGTHLAAPGYVDLDTF--Mp-----nAKTDSTYDIDIF 632  Fibrobacter s...
WP_015732182  426 grnHHFCSETHAQFKYKKGARFSISGNDDIWVFIDNKLAVDIGGNHLSAPGYVDVDKFlpN-------AKQDSIYDIDIF 498  Fibrobacter s...
BAB47241      229 YCERHTSRSTIRIETSLEL 247  Dictyostelium discoideum
AAB07590      224 YCERHTTASTIRIETNLQV 242  Dictyostelium discoideum
AAO52466      233 YCERHTDGSTISIQTTIQA 251  Dictyostelium discoideum
AAO52378      221 YCERHTPYSKMKIQTDIQA 239  Dictyostelium discoideum
WP_014547084  421 YAERHTSQSNFMMKTSIDL 439  Fibrobacter succinogenes
WP_015731987  508 YAERHTSQSNFMMRTSIDL 526  Fibrobacter succinogenes
WP_014546032  503 YAERKRTQSNFMMRTSIDL 521  Fibrobacter succinogenes
WP_015732318  375 YVERHTGSSNFRMRTSIDL 393  Fibrobacter succinogenes
WP_014546164  743 FSERNATGSNFKMRTSINL 761  Fibrobacter succinogenes
WP_014546163  757 YAERNATGSNFKMRTSINL 775  Fibrobacter succinogenes
WP_014546637  633 FCDRRTTMSNVRIKTNMFI 651  Fibrobacter succinogenes
WP_015732182  499 TCNRRAPSSDLRISTNMLY 517  Fibrobacter succinogenes
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