Conserved Protein Domain Family
TRAP_fused
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TIGR02123: TRAP_fused 
TRAP transporter, 4TM/12TM fusion protein
In some species, the 12-transmembrane spanning and 4-transmembrane spanning components of tripartite ATP-independent periplasmic (TRAP)-type transporters are fused. This model describes such transporters, found in the Archaea and in Bacteria. [Transport and binding proteins, Unknown substrate]
Links
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Statistics
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PSSM-Id: 273983
Aligned: 14 rows
Threshold Bit Score: 497.575
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
CAE42497      30 AGATLAAGALVWSLFQLWYASPLpfslhwgVFNDTEARALHLGTAMFLGYLAYPATKRSARD----R-MPWYDWVLALAA 104 Bordetella pert...
BAC49201      47 TLVAATAATILLCINQQFSLRFFig----yTQLNTEYFYLLIALMLPFTFLIFPGTERAPLD----R-IPWYDLVFFVVT 117 Bradyrhizobium ...
WP_011075119  52 VVVALAVLGIGGTMNQVFFWELFg-----lNLPTNSFLFLISACFLPIIFIVYPA-RKSSADtnkvG-VPWYDVLLGVLF 124 Corynebacterium...
WP_010877973  24 VFALGFFLVVVMLLSNFFGFSVPsy----lILTPMQHMGMFLSGIILISFVTHP----LRKN----G-AKWYDWLMGIVG 90  Archaeoglobus f...
WP_010895468  31 VTRTISVLCVLLSLAHIWFNTLS-------TWSELWISAIHFAGFAMICALWYPALPRWRGS----KvALAFDVLLALLA 99  Vibrio cholerae
WP_010878140  28 YALIVSAVAIVFSTFHVINGSFTg------LLQHDIVKSVHLAFAIALAFLIYPLSKKRTET----K-IPFYDFILAAVG 96  Archaeoglobus f...
WP_010896779  36 VGILFTVIAVGGALFHLYILNFH-------PIEPWIFRSVHIALGAVLGFLLFRG-WKTDSN----R-VHVVDWLLIAAT 102 Bacillus halodu...
WP_011070809  15 WPKALFYSALIFSIFQIITAAFH-------PVSTQVLRATHVGFLLLVVFLSYPAVG--KSR----P-WQPLAWLLGLAG 80  Shewanella onei...
WP_010899091  37 LPLLVSLLAIGLSLYHLYTSYFG-------TPLTLQHRSLHVAVILALVFFLYPPFKKANRK----S-VPLYDWLCVLLA 104 Bacillus halodu...
WP_005752131  36 QKGLITVIAVCYSLFHLYITFYP-------LP-TLLQRAIHVGVGAILIFLIYPATRKHRQG----G-VAWYDWLWVGIA 102 Pasteurella mul...

CAE42497     105 GFCGAYLYLFYNELAI-RPGQP--TSMDVATAVAGLLLLLEVTRRALGLPMTVLGAVFVLYALAGP--WLPd-VLAHRGA 178 Bordetella pert...
BAC49201     118 FAAALLLMSNVRKAAEaGWEFGgaPNSVIAAGLVMWVMLMEALRRTGGWSLLLSVFPFTVYPLFAEsgWLG--PFRGTQS 195 Bradyrhizobium ...
WP_011075119 125 IGAALWLSSSGPEISEyGWTMIa-PVTAQVLSVFYWVAVLEILRRCAGPIVAGLALAVSIYPMFAD--IIPvgFLQGISY 201 Corynebacterium...
WP_010877973  91 ASGGLYIFFVYPELML-RMGIT--TTIDVVFGLITIIFLLEAGRRTTGAALAVLTMVFILIGLYDA------------GF 155 Archaeoglobus f...
WP_010895468 100 LACLIYLMLAEDALYErG---VkfVTSDWVFSILAILIVMEMIRRTMGWFIPTLILICLTYVSVWG--KWAggIFHFPGL 174 Vibrio cholerae
WP_010878140  97 FYVAFYLAMNYKELLFrAAIGY--TPFDFFIAVLAVIFVLEATRRVVNPALVVVAIIFILYAKFGA--SLPg-VLSHPSY 171 Archaeoglobus f...
WP_010896779 103 LFVTFYIYQNVSALLFrVGVMP--QPMDTIVAVLGLLIILELTRRTSGWTLPILSGVFIAYAFLGP--WLPg-FLNHGGY 177 Bacillus halodu...
WP_011070809  81 MATAAYQWIFEADLIQ-RSGEL--TDADMVMGIILIVLVFEAARRVMGWALPIICCIFLAYGLFGQ--YLPg-DLMHRGY 154 Shewanella onei...
WP_010899091 105 LSTTIYFFVDYAGIVH-RGGIPn--TYDLLFGVILVILILEAARRVTGWALPLLAVLFFIYGLFGR--ELSg-IWRHRGY 178 Bacillus halodu...
WP_005752131 103 SLGMGYLVHQYNDIMTiRGGIPn--TADIVVAILTVLAVLEVTRRITGLILVLFALLFLAYPFVSSmdFIPd-RLLTRPY 179 Pasteurella mul...

CAE42497     179 SIERLMSHMWLTTEGVYGVALGVSVSYIFIFVLLGSLLDKCGAGNYMMQVSFALLGHLRGGPAKVAVVSSAVNGLVSASS 258 Bordetella pert...
BAC49201     196 TLEQATAYHVLSGESLLGIPIQAFADTVIGFLVFGTALMMTGAGKFFINLAFALCGTFRGGAAKVCIFASGLLGMMSGSI 275 Bradyrhizobium ...
WP_011075119 202 DPVTLAQVHVMGTESIHGLPLQTAATILVGFMLFGVTLQHTGGAEFFNDLSRAIFGRYRGGSAKVSVASSASMGMMSGSA 281 Corynebacterium...
WP_010877973 156 DISSLVTRIYLYNVGIFSTPFQVATFMIFIFMFFGALLSEIGVGKFFTDLAFALTGARKGGPAKVAVVASSLLGTMSGSA 235 Archaeoglobus f...
WP_010895468 175 SAETLLYRSFYSSEGMFGSIAAISWSFVFMFILFGAFLVRSGVGDYIMDVSRAAAGKVVGGPGFIAVLASGLMGSVSGSS 254 Vibrio cholerae
WP_010878140 172 DWKQILEHLYYTKEGIFGTPIAVSSSFVVLFVIFGAFLERSGAGRFFIDLAYSLTGWMVGGPAKAAVVSSALMGTISGSS 251 Archaeoglobus f...
WP_010896779 178 SFDRFVTYIY-SLDGVFGVTVDVSSKYILLFIVFGAFLQMSGVGRFFIDFSFSLAGGMRGGPAKVSVISSGLMGMMNGTS 256 Bacillus halodu...
WP_011070809 155 GVDQIINQLSFGTEGLYGTPTYVSATYIFLFILFGAFLEQAGMIRLFTDFAMGLFGHKLGGPAKVAVVSSALMGTITGSG 234 Shewanella onei...
WP_010899091 179 GWDELINFMYVTTEGVYGTAIGVSATYIFLFILFGAFLSKSGMGQFFNDMALAIAGQTKGGPAKVSVIASGFLGSINGAA 258 Bacillus halodu...
WP_005752131 180 DVGDIFGQLYLKTEGLYSSAIGASVTFIFLFILFGAFLAKSGMGQLFNDIALAIAGDKQGGPAKVAVISSGFMGSINGAA 259 Pasteurella mul...

CAE42497     259 VANVVTGGIFTIPLMKKAGYGGVRAGAIETASSVNGQIMPPVMGAAAFLMIEYVGIPYTDIIRHAILPASISYIALFYSV 338 Bordetella pert...
BAC49201     276 ISNVLTAGTMTIPVMKKSGFRASYAGAIEACASTGAVLAPPVMGATAFVIAQFLNVSYADVAVAAIIPAALYYVGLFMQV 355 Bradyrhizobium ...
WP_011075119 282 VSNVLTTGPMTIPAMIRSGFTPKTAGAIEATASSGGSITPPIMGTAAFLMVSFLGIPYTEIIIAATIPAALYFIGIFLQV 361 Corynebacterium...
WP_010877973 236 TGNVVTTGTFTIPLMKRAGYKPETAGAIEASASTGGQLMPPVLGSAAFIMPLFLGIRYWDVVVASVIPALLYYFALYIFV 315 Archaeoglobus f...
WP_010895468 255 VANTVSTGVITIPMMKKAGFPARFAAGVEAAASTGGQLMPPVMGAGAFIMASYTQIPYVDIVAVSFIPALIYFLSVAFFV 334 Vibrio cholerae
WP_010878140 252 VANTVTTGAFTIPLMKRVGYKPEFAGAVEPAASTGGQIMPPIMGAAAFIMAEFVGMPYINIVYAAIIPAFLYFFGVFSAV 331 Archaeoglobus f...
WP_010896779 257 AGNAVATGSLTIPLMRRVGYKGQFAAATEATASAGGQIMIPIMGAGAFIMAEITGIRYSEIIIAAAIPAFLYFLSVYFMV 336 Bacillus halodu...
WP_011070809 235 VANVVTTGQFTIPLMKRFGYRPAFAGGVEATSSMGSQIMPPIMGAVAFIMAETINVPFIEIAKAALLPALLYFCSVFWMV 314 Shewanella onei...
WP_010899091 259 IANVVTTGSFTIPLMKKIGYHRNFAGAVEAAASVGGQILPPIMGAAAFIMAEILGIPYSQIALAALLPALLFYLAIIVQI 338 Bacillus halodu...
WP_005752131 260 VANVVSTGAFTIPLMKKIGYHRNFAGAVEASASVGGQILPPIMGASAFIMAETTGVSYGTIALAALFPAVLYYLGVIAQV 339 Pasteurella mul...

CAE42497     339 HLEALKLGIEPMMAAGKPrtplqklagwgmgisgtliamglvywigvgvqavagaaaiwillamlvalniwllrvaarhp 418 Bordetella pert...
BAC49201     356 DAYAARHGLKGIPRAELP-------------------------------------------------------------- 373 Bradyrhizobium ...
WP_011075119 362 DGYAALRNLHGEDRKLLP-------------------------------------------------------------- 379 Corynebacterium...
WP_010877973 316 DQEASKQKAFGVPREQL--------------------------------------------------------------- 332 Archaeoglobus f...
WP_010895468 335 RIEAKRMGVQIVTTSQEP-------------------------------------------------------------- 352 Vibrio cholerae
WP_010878140 332 DFEARKENLRGLSREELP-------------------------------------------------------------- 349 Archaeoglobus f...
WP_010896779 337 DFQAIKNGMKGLSRKELP-------------------------------------------------------------- 354 Bacillus halodu...
WP_011070809 315 HLEAKRANLCGLPKDQCP-------------------------------------------------------------- 332 Shewanella onei...
WP_010899091 339 HLRATKLGLKGISKENLP-------------------------------------------------------------- 356 Bacillus halodu...
WP_005752131 340 HFRAGKQNLKGLSKDQLP-------------------------------------------------------------- 357 Pasteurella mul...

CAE42497     419 dlpteidvnhpvrpEPWPTVRAGLHFLIPIGILVWCLSVEeLSAGLSAFWAAAATLLQMVTQrpltawf----------- 487 Bordetella pert...
BAC49201     374 --------------RIMDTIKDGWYYVFVIALLIVMLLYF-KRESHAPFYATALLLVLNQLFs----------------- 421 Bradyrhizobium ...
WP_011075119 380 --------------RVSQALRDGWPYVIALGILTGMLLTM-PSEAQVPFYIVALLLGIALVr------------------ 426 Corynebacterium...
WP_010877973 333 --------------PPLRPLLLKLYYLLPLVVLVSVLSSG-YSVEHAAVASIMAALFIEWFTr----------------- 380 Archaeoglobus f...
WP_010895468 353 ---------------FMKVLLSGWHNLIPLAVLVTLLVVR-FTPTYAAGLSILSVIVASWFS------------------ 398 Vibrio cholerae
WP_010878140 350 --------------SPLQVLKGGWYYLVPLFIIIYMLVSG-YTPILAGVYSIYAVIAIMILKplimn------------- 401 Archaeoglobus f...
WP_010896779 355 ---------------PLKGILKQSYLFIPVVLLIASLLMG-YSIIRSGTVSILACLIVSWIHp----------------- 401 Bacillus halodu...
WP_011070809 333 --------------DPWAAVKARWYLLIPLFILVYLLFSG-RTPLFSGMVGLALTSIVILGSaivlrlpsnalrfafwia 397 Shewanella onei...
WP_010899091 357 --------------QVMDVLKERGHLLIPLFFLLYMLFFSgRTIIYSAFLTIIVTVFVAMf------------------- 403 Bacillus halodu...
WP_005752131 358 --------------QFKAIMKARGHMLLPIVALVWFLIES-VPIGYAAVYTIGITVLISQl------------------- 403 Pasteurella mul...

CAE42497     488 ------------------------rgqaiaPAALLGWRDAIGglq----------------------------------- 508 Bordetella pert...
BAC49201     422 ------------------------------KDTRWTLATIGKfle----------------------------------- 436 Bradyrhizobium ...
WP_011075119 427 ------------------------------PSVKFGFKELFEmml----------------------------------- 441 Corynebacterium...
WP_010877973 381 ------------------------------AGIRKLFGVIFTviifglgftlassgldifsilvvvgaislfitmgiglv 430 Archaeoglobus f...
WP_010895468 399 ------------------------------KNHKMGPKAIIEale----------------------------------- 413 Vibrio cholerae
WP_010878140 402 --------------------------yrkpAEQREPLGKVLKgsilnil------------------------------- 424 Archaeoglobus f...
WP_010896779 402 -------------------------------TTRMGLKKVLGale----------------------------------- 415 Bacillus halodu...
WP_011070809 398 lgvlcagffqmgigvvfgviailvaicwfiKGGKDTLTICLHalv----------------------------------- 442 Shewanella onei...
WP_010899091 404 -----------------------------rKTTRMTIRDLLDale----------------------------------- 419 Bacillus halodu...
WP_005752131 404 -----------------------------rKETRMGIKEIIAale----------------------------------- 419 Pasteurella mul...

CAE42497     509 ----------------ddaRNMIGIAIACGTAGLIVGAITLTGLGLRMTAFVELVSMGNVLLMLIFTAIVCLILGLGMPT 572 Bordetella pert...
BAC49201     437 ----------------vngRTFVELVGILAGCGLLIGAFSMTGVVSSLANDLLHIAGDNPFLLLGMCALTSLILGLGLTT 500 Bradyrhizobium ...
WP_011075119 442 ----------------dagKSLGQIIAIIAGVGLILGGLSSTGVALSLSRDLLMLVGGNLILLLIAAALACFILGMGLTI 505 Corynebacterium...
WP_010877973 431 lkgaremtsiivrslassfKSVTPVAIACALAGVIAGVLAYTGLALTLSQFLVEISGGNIVILLILVVGITILLGMGMPT 510 Archaeoglobus f...
WP_010895468 414 ----------------qgaKNMATTAVLLVGIGLVINVISTTGIGNTFSLMINNWANGDLLTMLVLITLASLVLGMGLPV 477 Vibrio cholerae
WP_010878140 425 ------------salehggRSATTVAMACASAGIIVGVVTLTGLGFKIAAAAIALSHGYLPIILALTMLVSLILGMGVPT 492 Archaeoglobus f...
WP_010896779 416 ----------------lgmKNVIQLLAVCACAGIIVGVIALTGVGLRFSSMLLGIADANKLLALLFAMGISIILGMGMPT 479 Bacillus halodu...
WP_011070809 443 ----------------egaRHAVPVGIACALVGVIIGIVSLTGIASTFASYILAVGQDNLFLSLVLTMITCLVLGMGIPT 506 Shewanella onei...
WP_010899091 420 ----------------qgaRNAIGVAVACACVGIIVGVATMTGFGLKLANGIVMLGGESLFLTLFFTMIACIILGMGLPS 483 Bacillus halodu...
WP_005752131 420 ----------------dgaKQSLSVMAACAVVGIVIGVVNLTSFGTVITSSIVTLGAGSLLFTLFLTMIASMILGMGLPS 483 Pasteurella mul...

CAE42497     573 TANYILMATLMAPVVVELGaqn---------------------------------------------------------- 594 Bordetella pert...
BAC49201     501 TACYIFLAILVAPALEKLG------------------------------------------------------------- 519 Bradyrhizobium ...
WP_011075119 506 SAAYVFLAIVMVPAIIAMD------------------------------------------------------------- 524 Corynebacterium...
WP_010877973 511 PAVYVLCATSVAPALVEMG------------------------------------------------------------- 529 Archaeoglobus f...
WP_010895468 478 TAAYIVLGTLSAPALYKLLaesqlvdlmvsgqlpeqakaifmlaapdqlsllnapmaaekahelislvpadfvetllqqs 557 Vibrio cholerae
WP_010878140 493 TANYIITSTIAAPAIITFMaqgygmpv----------------------------------------------------r 520 Archaeoglobus f...
WP_010896779 480 TAAYAVAAAVVAPGLIQIGie----------------------------------------------------------- 500 Bacillus halodu...
WP_011070809 507 IPNYIITSSIAAPALLDLG------------------------------------------------------------- 525 Shewanella onei...
WP_010899091 484 IPTYIITATMAAPALVTLG------------------------------------------------------------- 502 Bacillus halodu...
WP_005752131 484 IPAYIITATMAAPALATFN------------------------------------------------------------- 502 Pasteurella mul...

CAE42497     595 ----gliIPLIAVHMFVFYYGIMADITPPVGLATFAAAAISGADPIKTGVQGVTYALRTAVLPFMFVFNPLLLLIDV--- 667 Bordetella pert...
BAC49201     520 -------LNRMAVHMFIFYWGMLSSITPPVAIASFAAAGIAGSPAMKTGWESMWVGSIIYFIPFFFVLNPALVLQGS--- 589 Bradyrhizobium ...
WP_011075119 525 -------VNPIAAHLFIIYWASISYITPPVGLAAFAAAGISKASPMATSFEAMRFGAVKYVVPFGFVLNPALVAQDS--- 594 Corynebacterium...
WP_010877973 530 -------IPPIAAHFFIFYFGILAPLTPPVAITAYAGAAVAKADFWKTGIEAFRMALIGWFIAFSFISRPEMLILPIesl 602 Archaeoglobus f...
WP_010895468 558 lgleaigLALLSAHLIIFWLSQDSNVTPPVCLTAFAAATIAKTPPMRTGFTAWKIAKGLYLVPVLIAYTQLISWDVA--- 634 Vibrio cholerae
WP_010878140 521 efletypELVLPAHMFVFYFGVAADLTPPVALAAYAGSAIAGGDPWKTGINAVKIGIGKYLVPYLFIFSPALLLIGV--- 597 Archaeoglobus f...
WP_010896779 501 ---------pLHAHMFVFYYAVMSAITPPVALAAYAAAGVAGTDPFKTGVDAFKLGLAAFIVPFMFIYSPAIMMEG---- 567 Bacillus halodu...
WP_011070809 526 -------VPLIVSHMFVFYFGIMADLTPPVALACFAAAPIAKESGFKISLWAIRIAIAGFVIPFMAVYDPALMLQSD--- 595 Shewanella onei...
WP_010899091 503 -------IEPLVAHLFVFYFGLFANITPPVALAAFAAAGISGGDQMKTGFISMKLAIAGFIVPYMFVYNEALLLLNt--- 572 Bacillus halodu...
WP_005752131 503 -------VPVLVAHMFVFYFGIFANITPPVALAAFAGAGIAQGDPMKTGWQSLRLAVAGFIVPFMFVYNPNMLMIDV--- 572 Pasteurella mul...

CAE42497     668 --N------------SWTELILVAGSATLASLTFASATLGWF---R---VRCTMLEIVVLLAVTFMLFRP--------DW 719 Bordetella pert...
BAC49201     590 --Spyl-------agLGLMALAAFGTLFICGGIQGYQPFVGD---LrgaGALEWPIRVLLVIGGFVVATPgggimplsQM 657 Bradyrhizobium ...
WP_011075119 595 --L--------------PNIITSGLASIVAVFAISATFSGYLqfiE---ARVNLVLRVALGIGGFMVFLP--------QW 647 Corynebacterium...
WP_010877973 603 dlS------------AISNVVFGVFASVLAALLSGGVISGYL---F---GHLNAMQRVSFAIALILLLISlf-----yTE 659 Archaeoglobus f...
WP_010895468 635 --T----------------VVTIGIFAIFGTYAMIGAIEGYL---Eg---RLNLLWRLLLAVIGVLLVWPs------lPI 684 Vibrio cholerae
WP_010878140 598 --Ktp---------aDVFNLLILLATVMLGIMAINAGTIGCI---T---KPLSKAYRLIAIAAGALLLFP--------DW 652 Archaeoglobus f...
WP_010896779 568 ---------------EIMSIALATITASVGVYLLAAAVQGWF---Ag--KAALTVVRLLLIVAAVCLIHS--------SW 619 Bacillus halodu...
WP_011070809 596 --S-------------WLATIYVLIKVTVAIGIWGVVFTGYL---L---QKLYLWERVIGFLAGGSLILA--------TP 646 Shewanella onei...
WP_010899091 573 ---------------tFIEGALVVVTSITGVVMLGAAAEGYL---F---TKIPLFLRILLFGGALLFMNP--------NL 623 Bacillus halodu...
WP_005752131 573 --SnvavtaktfplpHIVDIISVLISSTIGVLGLSAATEGYF---K---QAMPIWQRVILAIGSFMLIIP--------EL 636 Pasteurella mul...

CAE42497     720 LLDQVSERYQARPAAEVVQTAAAL 743 Bordetella pertussis Tohama I
BAC49201     658 QVTMLGLAILAPTILIALLLIRRQ 681 Bradyrhizobium diazoefficiens USDA 110
WP_011075119 648 SITLSGLAIIVAVAVLALVLKRRH 671 Corynebacterium efficiens
WP_010877973 660 YLILVSALILALLNPVTLKSFRGN 683 Archaeoglobus fulgidus
WP_010895468 685 WIRLVCVALFIAIFIYSGKTAARV 708 Vibrio cholerae
WP_010878140 653 TAKVVGLVVFTIIFLKQQYSLHNE 676 Archaeoglobus fulgidus
WP_010896779 620 VYDFVALGIVAIAFILQRTVNKQT 643 Bacillus halodurans
WP_011070809 647 LSDEIGFGLALLFIVQHSLRARKL 670 Shewanella oneidensis
WP_010899091 624 VQDLMGFAIIGFVLLYQWWRGKKQ 647 Bacillus halodurans
WP_005752131 637 MTDLIGIAVVAVMI-WLNFRRPSL 659 Pasteurella multocida
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