2PKP,1V7L


Conserved Protein Domain Family
LEUD_arch

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TIGR02087: LEUD_arch 
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3-isopropylmalate dehydratase, small subunit
This subfamily is most closely related to the 3-isopropylmalate dehydratase, small subunits which form TIGR00171. This subfamily includes the members of TIGR02084 which are gene clustered with other genes of leucine biosynthesis. The rest of the subfamily includes mainly archaeal species which exhibit two hits to this model. In these cases it is possible that one or the other of the hits does not have a 3-isopropylmalate dehydratase activity but rather one of the other related aconitase-like activities.
Statistics
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PSSM-Id: 273961
Aligned: 8 rows
Threshold Bit Score: 257.35
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
2PKP_A   5 GRAHKFGDDVDTDAIIPGPYLRTTD-PYELASHCMAGIDENFPKKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVI 83  Methanocaldococcus ja...
O26917   7 GRVWRFGDNVDTDMIIPGRYLRTFS-LDELASHVMEGARPEFASQVRKGDIIVAGRNFGCGSSREQAPVALKHAGVVAII 85  Methanothermobacter t...
Q8TJM9   8 GRVWKFGDDIDTDVIIPGKYLRTKD-MQIFAAHAMEGIAPEFTKKAKPGDIIVAGENFGCGSSREQAPLAIKHAGIACVV 86  Methanosarcina acetiv...
Q58667   5 GRAHKFGDDVDTDAIIPGPYLRTTD-PYELASHCMAGIDENFPKKVKEGDVIVAGENFGCGSSREQAVIAIKYCGIKAVI 83  Methanocaldococcus ja...
Q8TW31   5 GRAHVFGDDVDTDQIIPGRCLRRVS-YDELGRYAMTGADPEFPEKVREGDVIVAGKNFGCGSSREQAVMALQQAGVACVV 83  Methanopyrus kandleri...
O59393   5 GKVWKFGDDISTDEITPGRYN-LTKdPKELAKIAFIEVRPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVI 83  Pyrococcus horikoshii...
Q974Q9   5 GKVLKFGDKIDTDIIIPARYLKYTD-PQYLAQHAMEPLDPEFYKKASAGVILVAGKVFGMGSSREQAAIALKAAGVRAII 83  Sulfolobus tokodaii s...
1V7L_A   5 GKVWKFGDDISTDEITPGRYNLTKD-PKELAKIAFIEVRPDFARNVRPGDVVVAGKNFGIGSSRESAALALKALGIAGVI 83  Pyrococcus horikoshii...
2PKP_A  84 AKSFARIFYRNAINVGLIPIiANt---DEIKdGDIVEIDLDKEEIvI-TNKNKTIKCETPKGLEREILAAGGLVNYLKKR 159 Methanocaldococcus ja...
O26917  86 AESFARIFYRNAINIGLPVI-MAk--vDADD-GDEVSIDLRSGQI-RnLTAGSEYRMKPFNDYMLSILEDGGLVNHYLKT 160 Methanothermobacter t...
Q8TJM9  87 AKSFARIFFRNAINVGLPLMeADi---ECQe-GDEIEVDLLKGEV-R-VPGKGVFVGNKLPDFLLDILTDGGLVSHRKKA 160 Methanosarcina acetiv...
Q58667  84 AKSFARIFYRNAINVGLIPIiANt---DEIKdGDIVEIDLDKEEI-ViTNKNKTIKCETPKGLEREILAAGGLVNYLKKR 159 Methanocaldococcus ja...
Q8TW31  84 ARSFARIFYRNAINRGLPTVeAEedptEVVEdGNRVTVDLDELVL-R--AGSEEVPLREPPEFALQAWREGGLLELVKKN 160 Methanopyrus kandleri...
O59393  84 AESFGRIFYRNAINIGIPLLlGKt---EGLKdGDLVTVNWETGEV-Rk-GD-EILMFEPLEDFLLEIVREGGILEYIRRR 157 Pyrococcus horikoshii...
Q974Q9  84 AESFARIFYRNAINNGLPAIvLPgv-tQLINeGDYVKINVETGEI-I-VNNQKVYKGRGITGMPLKILESGGLLDYLKKV 160 Sulfolobus tokodaii s...
1V7L_A  84 AESFGRIFYRNAINIGIPLLlGKt---EGLKdGDLVTVNWETGEV-R-KGD-EILMFEPLEDFLLEIVREGGILEYIRRR 157 Pyrococcus horikoshii...
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