4KP2


Conserved Protein Domain Family
IPMI_arch

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TIGR02086: IPMI_arch 
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3-isopropylmalate dehydratase, large subunit
This subfamily is a subset of the larger HacA family (Homoaconitate hydratase family, TIGR01343) and is most closely related to the 3-isopropylmalate dehydratase, large subunits which form TIGR00170. This subfamily includes the members of TIGR01343 which are gene clustered with other genes of leucine biosynthesis. The rest of the subfamily includes mainly archaeal species which exhibit two hits to this model. In these cases it is possible that one or the other of the hits does not have a 3-isopropylmalate dehydratase activity but rather one of the other related aconitase-like activities.
Statistics
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PSSM-Id: 273960
Aligned: 8 rows
Threshold Bit Score: 594.047
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4KP2_A  22 MTLVEKILSKKVGYE-VCAGDSIEVEVDLAMTHDGTTPLAYKALKEMS-----DSVWNPDKIVVAFDHNVPPNTVKAAEM 95  Methanocaldococcus ja...
Q9WYC7   3 KTLAEKIFSEHVGRD-VKAGEIVLARVDIAMAQDGTGPLMINEFRELG-----FKEVKVPKAFLFIDHASPSPRKELSNS 76  Thermotoga maritima MSB8
Q58409   1 MTLVEKILSKKVGYE-VCAGDSIEVEVDLAMTHDGTTPLAYKALKEMS-----DSVWNPDKIVVAFDHNVPPNTVKAAEM 74  Methanocaldococcus ja...
Q9ZNE0   3 QTLAEKILSHKVGRP-VRAGELVVVEVDQVMVVDSIAGSFFKRLEY-Le----ATPRYPERVSIVIDHVAPAANLEVAKA 76  Thermus thermophilus ...
Q8TW29   2 PSVAERILSEKVGEP-VEAGETVYVEPDVIMLHDGSGATALRTLRELGv----ERVESPEKVVLIFDHSVPPSSVEAANR 76  Methanopyrus kandleri...
Q9V1J0   1 MTLVGKLLNAK-------PGEAVIRKVDLVYAHDGTMPLIIEAFNR-------IFNEVRTRAYIFFDHVYPAPTVKVANL 66  Pyrococcus abyssi GE5
Q974R0   3 QTLTEKILSRASGKS-VAPGDVVEVKVDIAAFHDLTGYHVIEVMEKAGm----LKVFDKQKIVIAFDHLAPPPDVRSAEI 77  Sulfolobus tokodaii s...
O27668   4 MNMTEKILAEAAGLReVTPGEIIEARVDLAMTHDGTSPPTIRTFRDIAsrggpARVWDPERIVMVFDHNVPANTIGAAEF 83  Methanothermobacter t...
4KP2_A  96 QKLALEFVKRFGIKN-FHkGGEGICHQILAEN-YVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVP 173 Methanocaldococcus ja...
Q9WYC7  77 QKMMREFGKEMGVKV-FD-AGDGISHQILAEK-YVKPGDLVAGADSHTCTAGGLGAFGTGMGSTDVAIIFGLGQNWFKVP 153 Thermotoga maritima MSB8
Q58409  75 QKLALEFVKRFGIKNfHK-GGEGICHQILAEN-YVLPNMFVAGGDSHTCTHGAFGAFATGFGATDMAYIYATGETWIKVP 152 Methanocaldococcus ja...
Q9ZNE0  77 QKEIREWGKRHGIRV-FD-VGRGVCHQVLIEEgLAQPGWVVVGSDSHSTTYGAVGAFGTGMGATDIALAAASGRTWLRVP 154 Thermus thermophilus ...
Q8TW29  77 QNELLEFARRHRIEH-VH-VDEGVCHQVLVEEgYAGPGRVVFGGDSHTPTSGAASALAFGFGGTDMAFALLYGELWIRVP 154 Methanopyrus kandleri...
Q9V1J0  67 HREIREFAKIHGIPV-VE--GKGISHQLVVELgLAEEAKIIVGGDSHTPTLGALGVFAVGMGATDVAIALGLGKIWLKVP 143 Pyrococcus abyssi GE5
Q974R0  78 QTQIRKFVKELKIPNfHD-INVGILHQILLEK-YANPGYVIVAADSHTTTSGAVGAFAQGLGASDVAAAVITGKTWVMVP 155 Sulfolobus tokodaii s...
O27668  84 QRVTREFAREQGIVNiFQ-NAAGICHQVLPERgFVRPGMVIVGADSHTCTYGAFGAFATGMGATDMAMVFATGKTWFMVP 162 Methanothermobacter t...
4KP2_A 174 KTIRVDIVGK-NENVSAKDIVLRVCKEIGRRGATYMAIEYGGEV-VKNMDMDGRLTLCNMAIEMGGKTGVIEADEITYDY 251 Methanocaldococcus ja...
Q9WYC7 154 ETIKVVVNGKlQDGVYAKDIILEIARILGSDGATYKALEFHGSC-IENMNVEDRLTISNMAVEVGAKAGLMPSDEKTREF 232 Thermotoga maritima MSB8
Q58409 153 KTIRVDIVGK-NENVSAKDIVLRVCKEIGRRGATYMAIEYGGEV-VKNMDMDGRLTLCNMAIEMGGKTGVIEADEITYDY 230 Methanocaldococcus ja...
Q9ZNE0 155 ESVKVVFRGRlPKGVTAKDAALEMVRLLTAEGATYMAVEIHLLDgAEALTRGERMTLANLTVEAGAKAGLVVPSGEILE- 233 Thermus thermophilus ...
Q8TW29 155 RTVRVHVEGElEEPATAKDLALTVVGELGAGYADYAVLEYTGLP--ERMSLGDRMCLCNLATEAGAKSAYVPPKEGPEE- 231 Methanopyrus kandleri...
Q9V1J0 144 ESIAVLLDGSpREYIMASDVMIHLITSLKDREMSYNAIEFFNVP----FSFDERLTLTNFSVEANAKTAIIG---EEYE- 215 Pyrococcus abyssi GE5
Q974R0 156 QSFKIMLEGKpGKWINGKDVALKILGDFKADYFNGMSIEIFVRE-PSAFPMDFRATVSNMGIEMNADALMFVPDEETVNY 234 Sulfolobus tokodaii s...
O27668 163 EAMRIEVTGEpEGHVYAKDVILHIIGEIGVDGATYRSVEFTGDT-IESMDVSGRMTICNMAVEMGAKNGIMEPNRQTLDY 241 Methanothermobacter t...
4KP2_A 252 LKKERGLsdediaklkkERITVNRDEANYYKEIEIDITDMEEQVAVPHHPDNVKPISDVEG--TEINQVFIGSCTNGRLS 329 Methanocaldococcus ja...
Q9WYC7 233 LKKMGREe--------dFRELKADPDAVYETEIEIDATTLEPLVSLPHYVDNVRKVSEVEKekIKIDQVFIGTCTNGRLQ 304 Thermotoga maritima MSB8
Q58409 231 LKKERGLsdediaklkkERITVNRDEANYYKEIEIDITDMEEQVAVPHHPDNVKPISDVEG--TEINQVFIGSCTNGRLS 308 Methanocaldococcus ja...
Q9ZNE0 234 -MYRVPDw------------LYPDPDARYAKEVEIDLSALTPRVSVPFYVDNVHEVAQVKG--KRVDQVFIGTCTNGRIE 298 Thermus thermophilus ...
Q8TW29 232 ----------------------LRPGD-ADEVIELDASEVEPVVSVPHRVDDVRPVGDVQG--VEVTRVFVGSCTNGRYR 286 Methanopyrus kandleri...
Q9V1J0 216 -------------------------GGGYSDEITIELDSLPPMVAKPFSPANGVSVEDVEG--TKIDQVFIGSCTNGRFE 268 Pyrococcus abyssi GE5
Q974R0 235 IKTNRGy---------ePNIVRPDEGAKYVDEYTIDLGKLEPLVAAPHSVDNVKTVNEVEG--LDVDQVFIGSCTNGRIS 303 Sulfolobus tokodaii s...
O27668 242 VRARTGRe---------FRVYSSDEDSQYLEDHHFDVSDLEPQVACPDDVDNVYPVHRVEG--THIDEAFLGSCTNGRYE 310 Methanothermobacter t...
4KP2_A 330 DLREAAKYLKGRE-VHKDVKLIVIPASKKVFLQALKEGIIDIFVKAGAMICTPGCGPCLGAHQGVLAEGEICLSTTNRNF 408 Methanocaldococcus ja...
Q9WYC7 305 DLEIALKILEKHG-KHPDVRLIVGPASRKVYMDALEKGIIKKFVELGAAVIPPGCGPCVGIHMGVLGDGERVLSTQNRNF 383 Thermotoga maritima MSB8
Q58409 309 DLREAAKYLKGRE-VHKDVKLIVIPASKKVFLQALKEGIIDIFVKAGAMICTPGCGPCLGAHQGVLAEGEICLSTTNRNF 387 Methanocaldococcus ja...
Q9ZNE0 299 DLRAAAEVLRGRK-VAPWVRLLVVPASSQVLEEAARDGTLLTLLEAGATIGTPGCGPCMGRHMGVLAPGEVCVSTSNRNF 377 Thermus thermophilus ...
Q8TW29 287 DVRVFTEILEELDgPHPDVRIVVVPASRRVLERMTEAGLTLKLIRMGVMIAPPGCGPCLGEHLGVLGDDDVCVSTANRNF 366 Methanopyrus kandleri...
Q9V1J0 269 QIKRAAEILDGEQ---VNVRTLVAPASINVYRRMIEEGLVRILIDAGVVILPPGCGPCLGRHMGVAGDNEVILSTTNRNF 345 Pyrococcus abyssi GE5
Q974R0 304 DFEIAAKILKGKR---VKSRCIAIPASYDLFKKAMELGYIETLVNAGCIVTYGTCGPCLGGHFGVAGPGETIVSTSSRNF 380 Sulfolobus tokodaii s...
O27668 311 DLKIAAEVIGDRR-VHEDVRFIVSPASREIYLKALEDGIIETFIRAGAIVCNPGCGPCLGAHMGVLAPGEVSIATTNRNF 389 Methanothermobacter t...
4KP2_A 409 KGRMGHINSYIYLASPKIAAISAVKGYITNKLD 441 Methanocaldococcus jannaschii DSM 2661
Q9WYC7 384 KGRMGNPNAEIYLASPATAAATAVTGYITDPRR 416 Thermotoga maritima MSB8
Q58409 388 KGRMGHINSYIYLASPKIAAISAVKGYITNKLD 420 Methanocaldococcus jannaschii DSM 2661
Q9ZNE0 378 RGRMGAPDAEIYLASPRVAAASAVAGYLTTPEE 410 Thermus thermophilus HB27
Q8TW29 367 PGRMGSRRAEIYLASPVTAAVAAAEGELVDPQD 399 Methanopyrus kandleri AV19
Q9V1J0 346 RGRMGSPKAEIYLASPVTAAVSALYGEITNPEG 378 Pyrococcus abyssi GE5
Q974R0 381 KGRMGSNDSKVYLAGPAVAAASALQGKITDPRR 413 Sulfolobus tokodaii str. 7
O27668 390 RGRMGDPASSVYLANPAVVAESAIEGVISAPQQ 422 Methanothermobacter thermautotrophicus str. Delta H
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