Conserved Protein Domain Family
gcw_chp

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TIGR02001: gcw_chp 
conserved hypothetical protein, proteobacterial
This model represents a conserved hypothetical protein about 240 residues in length found so far in Proteobacteria including Shewanella oneidensis, Ralstonia solanacearum, and Colwellia psychrerythraea, usually as part of a paralogous family. The function is unknown.
Statistics
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PSSM-Id: 273922
Aligned: 10 rows
Threshold Bit Score: 199.977
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_011000305  11 LLLTGAAaGVGQSAFAQTTPAAEAP-AaAPAPAL-TANVTLASQYRYRGIMQS--NNKPAIQGGFDYAIpagllPEGFYV 86  Ralstonia solan...
WP_011074283   4 MKIRTKF-LLTGALLSLAASSHAAE-DnQLFGGTiNGNVNFASDYVFRGESETldGDIPVVQGKLSWDH-----NQGWYA 76  Shewanella onei...
WP_011073341   5 LQKKRLAqLAGLALTTS-------L-FsSIAAAEvSGNISLTNDYRFRGVSQT--AGDFAVQGGIDWSF-----ESGFSV 69  Shewanella onei...
WP_003086461   1 MLKHLL--VLTCALLASSSALAQVM-ArDLGDFElKLA-TSPTRSMAQGLVTP--GSSGSFHGGLDLSH-----ESGWYI 69  Pseudomonas
WP_012272051   1 MIRPLL--LLSAAVLFSPVLLAQQM-KrQLGDFDfTLG-TTPSRSMAQGLISP--SAVGAFHGGLDFSH-----TSGWYL 69  Pseudomonas putida
WP_011044752   4 MNKKLITlASTCLLAAGSA------------HADvSSTVNLTSDYTFNGVSQT--DSDPALQASLDYAG-----DGGFYV 64  Colwellia psych...
WP_017156239   1 MKSSPLAcCLSFLLLG-VAPLAQAQ-DeDASTSPfSGTFAVTSDYLFRGISQT--NEEPAFQAGLTYKT-----PFGLYL 71  Xanthomonas axo...
WP_011045405   1 MNKIKLLaA------TFALTAIAP-----LVSAEvSVTGTLTSDYVFRGVSQT--DSSPAIQASLDYEH-----ESGFFA 62  Colwellia psych...
WP_011070887   1 MRKSLYSvL---ALSTGLLLTNNAF-Aa------vSGNIGGTSNYLWRGVTQT--NDAVAIQGGIDYSH-----DSGFYA 63  Shewanella onei...
WP_010920508   1 MKAMKIAlA------AAVATVALAGaA-SAQELKaSYNLGITSDYVFRGVSQT--QEDPAISGGIDLSY------GIGYA 65  Caulobacter vib...
WP_011000305  87 GNWNSSISWLS-DanssvS---APIEMDFYGGYKTEIVKN-VPIDVGVLQYYYPGSYP-EGftrphTTEGYAQIGYGPVT 160 Ralstonia solan...
WP_011074283  77 GVFSSNIKFAD-P-----N---LEIVTAPFIGKAGEFGDSgFTYDVMLFSYLYPGASY-SN-----YTELWLKVGKQFGR 141 Shewanella onei...
WP_011073341  70 GAWASNLDYDT-P-----DyngPDIEYDFYAAYGGEVHDN-LSYDITLYRYNYSGE---SDl---gYFE----MTAGVEF 132 Shewanella onei...
WP_003086461  70 GNWTSNLDPGK-P-----T------EIDSYAGFKRPLNNR-LGYEMGLIRYSRPEQPA-ND-----AAELYGGLSIFGSR 130 Pseudomonas
WP_012272051  70 GQYAPSMGV-T-P-----N---STLRLDSYLGYKHQFDSS-LGYEVGLIHYSQPNIAG-PD-----SYALYGGISVLGSR 132 Pseudomonas putida
WP_011044752  65 GTWASNVDFGAsD-----D---TNIEWDFYVGNYWQLNDK-VGLDAGVAYYTYHGDDGsSDy---qYGEAYTKFGYNSSM 132 Colwellia psych...
WP_017156239  72 GTWTSNVDFGA-G-----D---PDWEVDGFVGYNTDLGTR-WNFDVMINRYQYLGAGA-SN-----YAELITKTTFLKI- 134 Xanthomonas axo...
WP_011045405  63 GVWASNVDFE--D-----D---ANAEIDFYAGYFGEINDT-FSYDVMYNYYTYQGYSS-ADd------sDYGEFLFNAYI 124 Colwellia psych...
WP_011070887  64 GTWASNVDFG--N-----D---TSYELDLYAGYGGSITDD-LSYDFGYLYYAYPDAEG-Si----dFGELHGTITWKWVE 127 Shewanella onei...
WP_010920508  66 GVWASNVDFGa-D-----D---PTAEIDFYAGIKPTVGDT-S-FDLGVLYYGYVDDKG-LTpgsysFVELKAAASRAFGP 133 Caulobacter vib...
WP_011000305 161 --FKYSHAFSNLFGFADSHHSQ----YFDLSGNFDTGfWG-LTLNLHVGYQDVK------HQN---Pr--A--SYADWKI 220 Ralstonia solan...
WP_011074283 142 anLQLEITPTVDDWFGVDGWHGv---NYALHPSYSFD-NG-VKISASVGYQDLT------GDG---A---E--GWGHWNI 202 Shewanella onei...
WP_011073341 133 --SGFRVAYWYTNDFGGSDLDYh---YGELNYSYEFI-EH-WSLNLHYGYSIGD------ALDdgeDf--D--SYSDYSV 195 Shewanella onei...
WP_003086461 131 --LGAALSSDPGRNDTTLFADLg--vNPPFGFDVTLK-YGnHRLDNPASLSGG---------G---Yv--S--VFNDWSV 189 Pseudomonas
WP_012272051 133 --FGGALRDNPDNRTGTLFADFg--qLPLFDADFTVKlAH-HRLGTPFTIGDG---------S---Qv--N--AFSDWSL 191 Pseudomonas putida
WP_011044752 133 --GDTELNFWYAWDYFGTGAGHy---IMMAAHTFTVS-EG-HNIRVSIDRSTSDdvskwgWGN---Nf--DekSYNHYRI 200 Colwellia psych...
WP_017156239 135 ----YSVTVAYTDDLYGSKTDGy---YYAFDANWTLP-YD-FTFGAHAGHSVYT------SSL---SqvdH--DYNDFGV 194 Xanthomonas axo...
WP_011045405 125 --NSFTLGLGYASDYVNTGDSAq---YISAAYDIELP-KE-YALTLQAGYTMGD------AFDd------A--EYVDYSA 183 Colwellia psych...
WP_011070887 128 --LSYSHVINAGEDVAAEPFDNkdmsYLAATASFPLT-EK-LSLSFHYGYSTGD------VVEawfAe--D--NYADYNV 193 Shewanella onei...
WP_010920508 134 --ATVGAAVFYSPEYAGKGGSSt---YVEINAAMPVA-DK-LTLSGAVGNQS--------------IknyK--DYSTWNL 190 Caulobacter vib...
WP_011000305 221 GVTKDFGsG-WTASLAYIDTNAS-RlAYTNSHG-N-YMGKATALLSVTKTF 267 Ralstonia solanacearum
WP_011074283 203 GLSKAYY-G-LNFDLRYHASTVD-S-DHKVYGT-QtEIFDDRVVIGISKSF 248 Shewanella oneidensis
WP_011073341 196 VVSTELL-G-LGLSLAWLGTDLS-S-EKKVSDG-V-FQNDDTVLASVSYAF 240 Shewanella oneidensis
WP_003086461 190 NLSRPWL-G-IDLNLSYSGTSLT-GsDCSAYSGhN-SYCDTTFMLKASRPF 236 Pseudomonas
WP_012272051 192 ELSRPWL-G-IDLNLIYSNSSLSgG-GCDAYSGiN-TYCDSVVTLKAQRSF 238 Pseudomonas putida
WP_011044752 201 EYTTSFS-G-FDFNLAAEDTSMD-----------W-DTSDSRVVLSVSRTF 237 Colwellia psychrerythraea
WP_017156239 195 NVGKTFG-P-LGLSVGYYDTSKA-A-EFGFGRQ-N-SQNHLVATATVTWP- 238 Xanthomonas axonopodis
WP_011045405 184 TVAKTFF-D-FDFTAAVINTDID-D-A---------DNADFRFVLGVSRTF 221 Colwellia psychrerythraea
WP_011070887 194 TLSADTS-M-GTISFMVSDTDLS-D-D------------DAKIALGYSYSF 228 Shewanella oneidensis
WP_010920508 191 GLAYALT-DkLSADLRYHDTSEH-Gl----G-----KIYDSRVVVSLKAAF 230 Caulobacter vibrioides
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