Conserved Protein Domain Family
NuoC_fam
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TIGR01961: NuoC_fam 
NADH (or F420H2) dehydrogenase, subunit C
This model describes the C subunit of the NADH dehydrogenase complex I in bacteria, as well as many instances of the corresponding mitochondrial subunit (NADH dehydrogenase subunit 9) and of the F420H2 dehydrogenase in Methanosarcina. Complex I contains subunits designated A-N. This C subunit often occurs as a fusion protein with the D subunit. This model excludes the NAD(P)H and plastoquinone-dependent form of chloroplasts and [Energy metabolism, Electron transport]
Links
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Statistics
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PSSM-Id: 273897
Aligned: 20 rows
Threshold Bit Score: 151.23
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
Q9K1C1        29 ITVECLPEHYISVMTALR-DheELHFELLVDLCGVD-Y-S--TYKneawqgkR-FAVVSQLL----SVKnn-qRIRVRVW 97  Neisseria menin...
P33599        44 PVVWIKREQLLEVGDFLK-Kl-PKPYVMLFDLHGMDeR-L--RTHreglpaaD-FSVFYHLI----SIDrn-rDIMLKVA 112 Escherichia col...
Q8K9Y5        45 PVIWINKSLLLKVGKFLS-Ss-PKPYNMLFDLHGVDeR-F--RLNrlnlpeaD-FSIFYHLI----SIErn-sDILIKVP 113 Buchnera aphidi...
Q9ZDH3        27 LAYKIEPHFLLPFLKALK-EseELRFTVLTDLFGVD-F-P--Kke------kR-FEVVYNLL----SLKln-kNLIIKTH 89  Rickettsia prow...
P56896        30 YAFAVPPEQIVEFCRFLK-EhpALEFDFLSDICGVDhY-P--Et-------pR-FETVYHLY----SLKnk-wRVRIKCR 92  Sinorhizobium m...
WP_011715172  29 LVVWCDPEQVVDTLRTMR-DdpGMNFKLFIDVTAVH-Y-P--KRE-------KpFEVVYQLL----SVHkn-hRIRVKTL 91  Magnetococcus m...
WP_006279573  24 IVIYSTLDEIEKYLFFLR-DdeKCRFELLVDIFGVD-Y-Pn-REK-------R-FELIYNLL----SIVhn-iRVHIKLQ 86  Wolbachia
WP_000660869  28 PVFFLKVEGIVSVLTALKnDp-TLHYNFLNDLTAVD-W-LgkKEP-------R-FEVNYLLR----SENkassKIRIKVR 92  Leptospira inte...
WP_002864416  60 WVIEIKKEDNVKTLQMLK----TLGYLSFTEASAID-FiA--DKN-------G-FEVFYQLL----NLEkk-lRVRIKTF 119 Campylobacter j...
WP_001888047  60 AVFWIKKDDIFSVATILR----HLGYECLSEMSAIDlC-A--KKG-------H-FELFYQFVgfsdSCKnr-rRVRVKCV 123 Helicobacter py...

Q9K1C1        98 VSDDDFpvVESVVDIYNSADWYEREAFDMYGIMFNNHPDLRRILTDYGFVGHPFRKDFPISG 159 Neisseria meningitidis MC58
P33599       113 LAENDLh-VPTFTKLFPNANWYERETWDLFGITFDGHPNLRRIMMPQTWKGHPLRKDYPARA 173 Escherichia coli K-12
Q8K9Y5       114 LLKDDLn-VSTFISLFPNANWYERETWEMFGIIFDQHPNLTHIIMPNEWKGFPLRKDYPARA 174 Buchnera aphidicola str. Sg (Schi...
Q9ZDH3        90 ISEKES--IPSAMQILSAAYWYELEVYDMYGVNFNGNNDKRRILTDYDFEGHPLRKDFPLTG 149 Rickettsia prowazekii str. Madrid E
P56896        93 LGEPPH--VPTVTGVWRTANWHEREAWDMYGIRFEGHPDLRRIYMWEGFEGFPQRKDFPLRG 152 Sinorhizobium meliloti 1021
WP_011715172  92 VDADTP--VPSITGLWKAADWFEREMYEMFGILISGHPDLRRLLLDYDFDGFPLRKDFPVTG 151 Magnetococcus marinus
WP_006279573  87 LCESDM--PPSVAKIFSTALWFEREVFDMYGIEFSDHPDLRRILTDYGFKGHPMLKDFPLTG 146 Wolbachia
WP_000660869  93 LEDGES--VPSITSVFKGADWPEREVYDLFGISFIGHPNLDRILMPDNFQGHPLRKDFPLEG 152 Leptospira interrogans
WP_002864416 120 VGVKER--LQSVAHVFKGANWSEREIYDMFGIFIINHPNLKRILMPDDWFGHPLLKTYPLKG 179 Campylobacter jejuni
WP_001888047 124 LLPNES--VDSLSFLYRSANWSEREAYDMLGIVFDKHPYLKRLIMPHDWVGHPLLRSYPLKG 183 Helicobacter pylori
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