Conserved Protein Domain Family
nuoE_fam

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TIGR01958: nuoE_fam 
NADH-quinone oxidoreductase, E subunit
This model describes the E chain of complexes that resemble NADH-quinone oxidoreductases. The electron acceptor is a quinone, ubiquinone, in mitochondria and most bacteria, including Escherichia coli, where the recommended gene symbol is nuoB. This model does not identify proteins from chloroplast and cyanobacteria. [Energy metabolism, Electron transport]
Statistics
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PSSM-Id: 131013
View PSSM: TIGR01958
Aligned: 9 rows
Threshold Bit Score: 219.554
Threshold Setting Gi: 499190600
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
O66842        15 KLQEHINYFPK----KRQAILLCLHEIQNY-YG-YIPPESLKPLADMLELPLNHVEGVVAFYDMFDREDKA-KYRIRVCV 87  Aquifex aeolicu...
P57255        17 AIENQKKYYED----FRAISIEALKIVQKK-RG-WVSDQAIYAIAEILHINPSDVEGVATFYSQIFRKPVG-RNIIRYCD 89  Buchnera aphidi...
P56909        25 WAEATIKKYPEg--rEQSAVIPLLMRAQEQ-DG-WVTRAAIESVADMLGMAYIRVLEVATFYTQFQLQPVGtRAHVQVCG 100 Sinorhizobium m...
Q9ZDH5        19 LAETIIKKYPPe--gKRSAILPLLDLAQRQ-NGgWLHVSAIEYVANMLEMPYMRAYEVATFYTMFNLNPIG-KYHIQVCT 94  Rickettsia prow...
P56910         6 EIEAAAARYPD----RRSAIMPALMIAQKE-HG-HLPGPVLEEVAQILGVERVWVYELATFYTLFHTEPIG-RFHLQLCD 78  Sinorhizobium m...
WP_011001991   9 EIDRAVAKYPAd--qKQSAVMAALAVAQSE-KG-WVSPEVMQFVAEYLEMPPVWVEEVATFYNMYDTKPVG-RFKLTVCT 83  Ralstonia solan...
WP_003689950   9 QIDIELAKYPAd--qRRSAIMGALRIAQTE-KG-WLAPETIAFVADYIGITPAQAYEVATFYNMYDLEPVG-KYKLTVCT 83  Neisseria gonor...
WP_004085299  26 HIDHWLAKFPAd--qKRSALLQGLYAAQEQnQG-WLTDELIAAVAKYLDIPSVWAYEVATFYSMFETRKVG-RHNVAFCT 101 Xylella fastidiosa
WP_010888140  10 LVAEIFSRYPDtpqgRRSALMPLLREVQDA-EG-FVAAPRLAEIAELCGTTATEVRSVMSFYSTYHTVPTG-RYHLQVCS 86  Deinococcus rad...
O66842        88 SIVCHLMGTNKLLKALENILGIKPGEVTPDGKFKIV-PVQCLGACSEAPVFMV-N-D-D-EYKFESEVQLNEILSRYT 160 Aquifex aeolicus VF5
P57255        90 SVVCFLTGYKRIQIALENYLKIKIGETTKDDRFTLL-PVCCLGNCDKGPTIMI-N-E-D-TYSVLTPESIPSLLESYK 162 Buchnera aphidico...
P56909       101 TTPCMLRGAEDLIKICKKKIASEPFTLNEGGTLSWE-EVECQGACVNAPMVMI-F-K-D-TFEDLTPERLEEIIDRFE 173 Sinorhizobium mel...
Q9ZDH5        95 TTPCWLRGSDNIMKICEKKLAIKHKETTKDQKFTLS-EIECLGACVNAPVVQI-N-D-D-YYEDLNEAKMEKLIEQYL 167 Rickettsia prowaz...
P56910        79 NVSCMLCGSEALLTHLETTLGIRKGETTPDGAFTLS-TVECLGACEMAPVMQV-GdD---YHGNLDAARLDALLESFR 151 Sinorhizobium mel...
WP_011001991  84 NLPCALSGGERAADYLKQKLGIGFNETTADGTFTLK-EGECMGACGDAPVMIVnN-T-H-MCSFMSNEKLDALIADLK 157 Ralstonia solanac...
WP_003689950  84 NLPCALRGGMATGEYLKQKLGIGYGETTPDGKFTLV-EGECMGACGDAPVMLV-N-N-HsMCSFMTEEAIEKKLAELE 157 Neisseria gonorrh...
WP_004085299 102 NVSCWLNGAEDLVSYAEEKLGCKLGQSTADGRVYLKcEEECLAACAGAPMMVI-N-G-H-YHERLTKEKVDQLLDGLE 175 Xylella fastidiosa
WP_010888140  87 TLMCALAGSDALWDELVTRLDVQPGEVTPDGRFSVQ-KVECLGSCGTAPVLQL-N-DeG-FYERVGParlaellaalq 160 Deinococcus radio...
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