Conserved Protein Domain Family
nusA_Cterm_rpt

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TIGR01954: nusA_Cterm_rpt 
transcription termination factor NusA, C-terminal duplication
NusA is a bacterial transcription termination factor. It is named for its interaction with phage lambda protein N, as part of the N utilization substance. Some members of the NusA family have a long C-terminal extension. This model represents an acidic 50-residue region found in two copies toward the C-terminus of most Proteobacterial NusA proteins, spaced about 26 residues apart. Analogous C-terminal extensions in some other bacterial lineages lack apparent homology but appear similarly acidic. [Transcription, Transcription factors]
Statistics
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PSSM-Id: 273894
Aligned: 12 rows
Threshold Bit Score: 54.9995
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAK31158     387 LEEIMGQLLVTEGFSSVEDISSASIKELAS--IEGF-NEDIANELHNRANKYL 436 Wolbachia sp. wRi
Q92HF4       371 VEEVIGQLLSVTGFNSVEQIASSEISTLTR--IEGF-EEELAVEIKNRAINYV 420 Rickettsia conorii str. Malish 7
P57459       365 INENIIKILVKEGFSSLEELAYIPFNELLE--VKNL-TEDQAKKVREGAKSKL 414 Buchnera aphidicola str. APS (Acyrthosipho...
KEZ96470     361 VDEEISAILVSEGFNTVEEIAYVPVGELLA--VEGF-DEDIVEELRARARDAL 410 Xanthomonas vasicola pv. vasculorum NCPPB 895
WP_002810198 444 MNEETAFALAEHGVRTSEDLSDLAADEIVDfgIEGM-TQERASALILAARAEE 495 Xanthomonas fragariae
WP_003123505 442 MSKELALDLALRGVTTREDLAEQSIDDLLD--IDGM-DEERAGKLIMAARAHW 491 Pseudomonas aeruginosa
EJS90297      68 IDEDFAHILIEEGFSTLEELAYVSVSELTA--IDGLeDEDLVEELQARAKNAI 118 Pasteurella multocida subsp. multocida str...
CBA03666     304 IDADMLRSLAEAGITTRDDLAELAVDELIE--ITGV-NEETAKAVILTAREHW 353 Neisseria meningitidis alpha153
AIN47873     440 MNRHIALKLAEKQITTLEELAEQGVDDLAD--IEDL-TAEQAADFIMAARNIC 489 Pasteurella multocida
WP_011070031 365 INQELAKNLVKEGFSKIEDIAYIPINELLS--IDIL-NEKTAKLLKEQAQYAL 414 Wigglesworthia glossinidia
WP_011715266 370 LGEEVAAVLVNEGFTSAEEVAYVPLNELTS--IEGF-DEEIAQELRNRARDTL 419 Magnetococcus marinus
WP_010917934 374 VDEVIAQLLVTEGFAAVEDVAYVEPHEIAS--IEGF-DEETAEELQTRAREFL 423 Caulobacter vibrioides
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