Conserved Protein Domain Family
nusA_arch

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TIGR01952: nusA_arch 
NusA family KH domain protein, archaeal
This model represents a family of archaeal proteins found in a single copy per genome. It contains two KH domains (pfam00013) and is most closely related to the central region bacterial NusA, a transcription termination factor named for its iteraction with phage lambda protein N in E. coli. The proteins required for antitermination by N include NusA, NusB, nusE (ribosomal protein S10), and nusG. This system, on the whole, appears not to be present in the Archaea.
Statistics
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PSSM-Id: 273892
Aligned: 6 rows
Threshold Bit Score: 188.773
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P29157         1 MPLKLNTDQIKFIALFESMTGATVLDCLIDDRrnRLIFVIKKGEMGLALGKKGANVKRVQNMIGKEIEVIEHSENPEEFL 80  Thermococcus celer
P14026         1 MRIKLNTEDIMRISLFEKMTGANVIDSTSDDE--KIVFVVKEGDIGAAIGKGGENVKNATDKFGKKIDLIEYSEDLKQFI 78  Methanococcus v...
P15739         1 MTIRLSDEARQLIAVFETETDATAVDCLPDDD--RVVYVVTAGEMGAAIGDGGSRVDALEATLGRSVVLVEDAPTAEGFV 78  Halobacterium s...
P15738         1 MRVTLSDTALRHIALFEDVTGASAVDCLVDDD--RVCFLVATGEMSDAIGPDGTTVEQVEERLDKRVSLVENADTAELFV 78  Halococcus morr...
P11523         2 PEIKLTSEELKYMSLFQDITGVTARDCIIDDRnnRIILLINPESMGVAIGKNGLNVRKLEKLINKSVEIVGYQENLEDLV 81  Sulfolobus acid...
WP_010879384   1 MGVKLSADGIRYLTLFENLTGASVKDCLVYDd--KVVFVVRRGHMGVAIGKGGINVERARELIGKRIEIIEHSEDPAEFI 78  Archaeoglobus f...
P29157        81 RNiyKSLGVKVKRVHITEkRDGKRVALLDIGPREKPRAIGRGGQNINLVKELMERHHGIQDVVII 145 Thermococcus celer
P14026        79 KN--IFAPIELEDVWVKK-FGNDLVVYVRVHPRLRRAIIGDKGKNIDRAVDIAGRLAGVKNIKVV 140 Methanococcus vannielii SB
P15739        79 AN--ALSPAAVYNVTVSE--NDTTVAYAEVAHEDKGVAIGADGTNIETAKELAARHFDIDDIQLT 139 Halobacterium sp. NRC-1
P15738        79 AN--ALAPAVVHNVTISE--NASTVAYAEVDRADTGVAIGRDGETIETARRLAERQFDIDDIELA 139 Halococcus morrhuae
P11523        82 KN--LMSPARVKTIKVVQ-SNSKKTVYITVEPQDKGIAIGKNGRNVERAKLILKRYLDIDSVVVV 143 Sulfolobus acidocaldarius DSM 639
WP_010879384  79 ANifKPIKVNVK---LME-KEGSKIAVVSVSPDLKGIVIGKGGKNINKAKELAKRHHDIEDVIVR 139 Archaeoglobus fulgidus
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