Conserved Protein Domain Family
nqrC

?
TIGR01938: nqrC 
NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit
This model represents the NqrC subunit of the six-protein, Na(+)-pumping NADH-quinone reductase of a number of marine and pathogenic Gram-negative bacteria. This oxidoreductase complex functions primarily as a sodium ion pump. [Transport and binding proteins, Cations and iron carrying compounds]
Statistics
?
PSSM-Id: 273886
Aligned: 11 rows
Threshold Bit Score: 283.51
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
AAP05112      10 LNKTWYVILFIFALSLFSSVFLSTVYYILAPFEERAAIFDRDQQMLTAAHvldfsgkfqiyeegswqpavydkkshllKV 89  Chlamydophila c...
AAO76265       5 TNSNSYTIIYASVMVVIVAFLLAFVSSSLKATQDKNVQLDTKKQILAALN----------------------------IK 56  Bacteroides the...
O84281         9 LNQPWYIILFIFVLSLIAGTLLSSVYYVLAPIQQQAAEFDRNQQMLMAAQvissdntfqvyekgdwhpalyntkkqllEI 88  Chlamydia trach...
P43957         6 KDSVGGTILVVLLLSLVCSIIVAGSAVMLKPAQEEQKLLDKQKNILNVAGll---------------------------- 57  Haemophilus inf...
Q8ZBZ2         9 NDSIGKTLLVVVILCLVCSVVVAGAAVGLKAKQQEQRLLDKQRNILAVAGll-------------------------qpR 63  Yersinia pestis
Q9CLA9         5 KDSVGGTLLVIILLSLACSIIVAGSAVLLKPTQIEQKELDKQKNILSVAGll-------------------------qpT 59  Pasteurella mul...
Q9HZK8         4 QESTTRTLLVALVVCLVSSVFVAGAAVALKPTQAENRLLDKQRSILAIAGlg-------------------------epG 58  Pseudomonas aer...
Q9JVQ0         7 KDSFSGTLIVVLAVSLICSVIVAGAVVGLKPIQEKQKLQDKQGYILSVAGlm---------------------------- 58  Neisseria menin...
Q9RFV9         5 NDSIKKTLGVVVGLSLVCSIIVSTAAVGLRDQQKANAVLDKQSKIVEVAGid---------------------------- 56  Vibrio campbell...
Q9Z8B5        12 INQTWYIVSFILGLSLFAGVLLSTIYYVLSPIQEQAATFDRNKQMLLAAHildfkgrfqiqekkewvpatfdkktqllEV 91  Chlamydia pneum...
WP_021665389   3 RDKNSYTILYASVMVIVVAVLLAYVSQSLGDRQRDNEKIDKMQQILRSVNa--------------------------gIE 56  Porphyromonas g...
AAP05112      90 ADqhapvvTSsVLDAYTQGFVRPLLADKLGQMFsf-----eeKNINvtEfIEKHqnghfyqqplllFYVILANTEQaram 164 Chlamydophila c...
AAO76265      57 NV------ED-ADAEYQKYVKGDMLMNVDGTLT---------ENTG--E-FATN------------YEKEVKEHQR---- 101 Bacteroides the...
O84281        89 SStpp-kvTVtTLSSYFQNFVRVLLTDTQGNLSsf-----edHNLNleEfLSQPtpvihg-lalyvVYAILHNDAAsskl 161 Chlamydia trach...
P43957        58 qE------NTnVKETYAKFIEPRFVDLATGEYTqq-------aD--------DSqqa------ipaDADKARIRSRsktt 110 Haemophilus inf...
Q8ZBZ2        64 ML------AEeVQQAFATRIEPRLLDLQSGEFLkq-----dpATFDrsQaLRDNqmsi----altpAQDIAGIRRRanvv 128 Yersinia pestis
Q9CLA9        60 TK------NSeIKTIYANNIEARLVDLNTGDFApa------qpGFDaaKaVKNPaest----alsaEDDVAGIRVRanfa 123 Pasteurella mul...
Q9HZK8        59 MS------GKeVKALFDSRITAKVVDLQSGTFSdaq----dpLGYDplKaAKDPalsd----alpaAEDIASIKRReryt 124 Pseudomonas aer...
Q9JVQ0        59 dK------DTdIGKTFAERIEQRVVDLATGEYVkda-----pkDFSarIaGKDPaqsi----rikpEDDLAGIKSRakyt 123 Neisseria menin...
Q9RFV9        57 ------aeGKkVPELFAEYIEPRLVDFKTGDFVekaedgstaANYDqrKaAKDPaesi----kltaDEDKAKILRRantg 126 Vibrio campbell...
Q9Z8B5        92 ATkkvsevSYpELELYAERFVRPLLTDAQGKVFsf-----eeKNLNpiEfFEKYqesppcqqsplpFYVILENTSRtenm 166 Chlamydia pneum...
WP_021665389  57 DK------GK-VIARYTDVIKQELLINQDGTVAktf----egEQLAqnEaFTLN------------TRNAFKSAANdpsi 113 Porphyromonas g...
AAP05112     165 sAADVIKNPSVVRAIIIPISGFGLWGPIYGYLAVENNGDTVLGTAWYQQAETPGLGANIANPQWQKQFYGKKIFLQaaaG 244 Chlamydophila c...
AAO76265     102 -LHVFVCDVDGQTKYVVPVYGAGLWGGIWGYVALNEDKDTVYGVYFSHASETPGLGAEIATDWFQHEFAGKKTLEN---G 177 Bacteroides the...
O84281       162 sASQVAKNPTAIESIVLPIEGFGLWGPIYGFLALEKDGNTVLGTSWYQHGETPGLGANIANPQWQKNFRGKKVFLVsasG 241 Chlamydia trach...
P43957       111 eVYLVKDEQGQTQQVILPIYGTGLWSVMYGLVSVQPDGNTINGITYYQHGETPGLGGEIENPNWASLFKGKKLFDEq--H 188 Haemophilus inf...
Q8ZBZ2       129 eIYLVRGDGGQINKVILPIYGSGLWSMMYAFVAIDTDGKTVRGITYYDHGETPGLGGEIENPIWRNQWIGKRLFDDq--G 206 Yersinia pestis
Q9CLA9       124 eVYLVKNDAGQVTQVVLPFYGKGLWSMMYGFMSVQPDGNTVNGITYYDQGETPGLGGEIENPKWQAQFPGKKLYTAd--N 201 Pasteurella mul...
Q9HZK8       125 tVYLVETDG-KLDTLILPVRGYGLWSTLYGFLALKGDLNTVAGFGFYQHGETPGLGGEVDNPKWKALWVGKTLYDAq--G 201 Pseudomonas aer...
Q9JVQ0       124 eVYLVKGEDGKIGQIILPMHGNGLWSVMYGFVAIQPDGNTINGITYYEQGETPGLGGEIGNPLWQQKFVGKKLFDGq--G 201 Neisseria menin...
Q9RFV9       127 iVYLVK-NGDDISKVIIPVHGNGLWSMMYAFVAVETDGNTVSGITYYEQGETPGLGGEVENPVWRAQFVGKKLFDEn--H 203 Vibrio campbell...
Q9Z8B5       167 sGADVAKDLSTVQALIFPISGFGLWGPIHGYLGVKNDGDTVLGTAWYQQGETPGLGANITNPEWQEQFYGKKIFLQdssG 246 Chlamydia pneum...
WP_021665389 114 sLPLYIAEIEGQKKYIVPMNGAGLWGPIWGYIALNEDCNTIFGADFSHEGETPGLGAEITRSEFSGQFIGKEIFKE---G 190 Porphyromonas g...
AAP05112     245 ntdfattPLGLEVIKgsvQsafGTTPKALSSIDGISGATLTCNGVTEAYAQSLAP--YRNLLIS 306 Chlamydophila caviae GPIC
AAO76265     178 -------AVALGVVK---N---GKVEKADYQVDGISGGTITSVGVDAMLKACLNN--YISFLTK 226 Bacteroides thetaiotaomicron VP...
O84281       242 etdfaktTLGLEVIKgsvSaalGDSPKAASSIDGISGATLTCNGVTESFSHSLAP--YRALLTF 303 Chlamydia trachomatis D/UW-3/CX
P43957       189 q-------PAIRIVKg-------QAPQDEHSIDGLSGATLTGNGVQGTFNYWFSKdgFGPYLEK 238 Haemophilus influenzae Rd KW20
Q8ZBZ2       207 q-------PAIRIVKg------RAPANDPHAVDGLSGATLTSNGVQNSFNFWLGEngFGPFLKK 257 Yersinia pestis
Q9CLA9       202 q-------VGLYVGKg-------ASANAEHGIDAISGSTLTSNGVNNSFKFWLGQkgFGPFLAK 251 Pasteurella multocida subsp. mu...
Q9HZK8       202 d-------LAVQIIKgsvD---PQSAKATHQVDGLAGATLTSKGVDNLLHFWLGKdgFDAFLAN 255 Pseudomonas aeruginosa PAO1
Q9JVQ0       202 k-------LALHVGKg-------AGSDKEHGVDALSGASLTSKGVQGSFAYWFGEngYIPYLNK 251 Neisseria meningitidis Z2491
Q9RFV9       204 k-------PAIKIVKg------GAPEGSEHGVDGLSGATLTGNGVQGTFDFWLGDmgFGPFLAK 254 Vibrio campbellii ATCC BAA-1116
Q9Z8B5       247 ttnfattDLGLEVVKgsvRttlGDSPKALSAIDGISGATLTCNGVTEAYVQSLAC--YRQLLIN 308 Chlamydia pneumoniae
WP_021665389 191 e------FRSVAVVK---K---GQKAEGKDYVDGISGGTLTSDGVNEMLISSLRP--YALYLMN 240 Porphyromonas gingivalis
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap