Conserved Protein Domain Family
menC_gamma/gm+

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TIGR01927: menC_gamma/gm+ 
o-succinylbenzoate synthase
This model describes the enzyme o-succinylbenzoic acid synthetase (menC) that is involved in one of the steps of the menaquinone biosynthesis pathway. It takes SHCHC and makes it into 2-succinylbenzoate. Included in this model are gamma proteobacteria and archaea. Many of the com-names of the proteins identified by the model are identified as O-succinylbenzoyl-CoA synthase in error. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Statistics
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PSSM-Id: 273880
Aligned: 5 rows
Threshold Bit Score: 386.085
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q55117        10 YSYNFPLPKPVVTAHGHWQRRRGLIVELTDQrGNRGRGEIAPLPWFGTEDLASATDFCRSLKGRITPAQIEKIG------ 83  Synechocystis s...
Q9KQM6         7 YRYQLPMDSGVILRNEKLTQREGFIVELTEN-GRTARGEIAPLPGFSRETLEDAGLQAQALLEQWVKGHAIEWD------ 79  Vibrio cholerae...
P29208         7 YRWQIPMDAGVVLRDRRLKTRDGLYVCLREG-EREGWGEISPLPGFSQETWEEAQSVLLAWVNNWLAGDCELP------- 78  Escherichia col...
WP_010933506   9 CRYEMDFTAPVTVRGVLLARRQGLLLRLKSE-GVTAYGEVAPLIGLHTESLDEALQALATFIPELSRLDWNASDgrqrll 87  Chlorobaculum t...
WP_010994211  10 RPIARKFVRSLVTSHGIWEVREAIILRLTDTtGKVGWGEIAPISWFGSETLAQALDFCRQLPEEITQEIIFSIP------ 83  Nostoc sp. PCC ...
Q55117        84 ---DRLPCCGFAFGSAEWELESGsv-------ieNSPNSLSYCQLLPTGEAALDYLASNP--QLGASTFKWKIGVGDFAV 151 Synechocystis s...
Q9KQM6        80 ---AQHPSVAFGLSMAHYELEQA-----------LPEQGNYYVAPLCTGDPDELLPVLNN--LPGQKVAKVKVGLYEPIR 143 Vibrio cholerae...
P29208        79 ----QMPSVAFGVSCALAELTDT-----------LPQAANYRAAPLCNGDPDDLILKLAD--MPGEKVAKVKVGLYEAVR 141 Escherichia col...
WP_010933506  88 deaALPPSVTTGIEMALINLEATersslpsftdeFPPASKIPVNALLAGDPQAVLNRAAKryAEGFRAFKLKVRKGELDG 167 Chlorobaculum t...
WP_010994211  84 ---DDLPACQFGFESALEAMGSGe---------dVTITNAQFSALLPAGEAALHQWQSLW--DEGYRTFKWKIAVGEVAQ 149 Nostoc sp. PCC ...
Q55117       152 ERDLYGQLWRRLPEgCQIRLDANGGLSVDIAQQWLTLLDRqreNSGPKIQYLEQPLPPGeiDEMFRLQEDFATSIALDEA 231 Synechocystis s...
Q9KQM6       144 DGMLVNLFLESMPD-LTLRLDANRAWTPAKALKFAQYVAP---SLRSRIAFLEEPCQSP--SESIAFSIDTGIAIAWDET 217 Vibrio cholerae...
P29208       142 DGMVVNLLLEAIPD-LHLRLDANRAWTPLKGQQFAKYVNP---DYRDRIAFLEEPCKTR--DDSRAFARETGIAIAWDES 215 Escherichia col...
WP_010933506 168 AVACIRALHEAFGDkAELRLDANQSLEFDEAVAFGKALPP------GCVAYIEEPLTDA--ALISDFHAATGLPSALDES 239 Chlorobaculum t...
WP_010994211 150 ELRIFDSLTQILPAsAKLRLDANGGLSYPEAHLWLQACD----NLPVEVEFIEQPLPVEqfSQMLELSEAYPTAIALDES 225 Nostoc sp. PCC ...
Q55117       232 VCS---LAQLAQLYDKGWSgLYILKAAIMGNPRVLNHWLKTHP---IPAIFSSVFETAIARGQVLALAQKWNLPDHAVGF 305 Synechocystis s...
Q9KQM6       218 LQEavrDADFALENLLGVK-TIVIKPTLIGSVYRVEALIEKAKtlgLQAVISSSLESSLGLNQLARLAHKLLPNEVPGLD 296 Vibrio cholerae...
P29208       216 LRE----PDFAFVAEEGVR-AVVIKPTLTGSLEKVREQVQAAHalgLTAVISSSIESSLGLTQLARIAAWLTPDTIPGLD 290 Escherichia col...
WP_010933506 240 LWQ---RPELLDEIGPDPLgALVLKPNCIGGIAKSLDLAAKAHrmgLQAVYSSAFESSVSLGLYALMAAVSSPAPAASGL 316 Chlorobaculum t...
WP_010994211 226 VAN---LKQLAACYAQGWRdVFVIKPAIAGSPSRLRQFCQQHE---IDAVFSSVFETAIARKASLQLAAELSRDNRAVGF 299 Nostoc sp. PCC ...
Q55117       306 AP--LREPITEATPDS 319 Synechocystis sp. PCC 6803 substr. Kazusa
Q9KQM6       297 TIglFRAQLETPWPNS 312 Vibrio cholerae O1 biovar El Tor str. N16961
P29208       291 TLdlMQAQQVRRWPGS 306 Escherichia coli K-12
WP_010933506 317 DTasFLARDLTATPFA 332 Chlorobaculum tepidum
WP_010994211 300 GVnhLFHQEAENWLQS 315 Nostoc sp. PCC 7120
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