4TVX


Conserved Protein Domain Family
casE_Cse3

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TIGR01907: casE_Cse3 
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CRISPR-associated protein Cas6/Cse3/CasE, subtype I-E/ECOLI
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by CT1974 from Chlorobium tepidum, is found in the Ecoli subtype of CRISPR/Cas regions and is designated Cse3 (CRISPR/Cas Subtype Ecoli protein 3). The representative of this family from Thermus thermophilus HB8 (TTHB192) has been crystallized and found to have a structure consisting of two domains with opposing parallel beta-sheets known as a beta-sheet platform. This structure is similar to those found in the Sex-lethal protein and poly(A)-binding protein. This structure is consistent with an RNA-binding function.
Statistics
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PSSM-Id: 273869
Aligned: 5 rows
Threshold Bit Score: 267.159
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4TVX_A         1 MYLSKVIIAR-----A-----WSRDLYQLHQGLWHLFPNRPDAARD-------FLFHVEKRNTPEGChVLLQSAQMPvS- 62  Escherichia col...
WP_010933630   1 MIATMLTLSR-----KdvkalRITDSYSLHRVIYSLFEDVRSEAEKrssvpsgFLFADKGGDAKGRK-ILILSDRPP-L- 72  Chlorobaculum t...
Q46897         1 MYLSKVIIAR-----A-----WSRDLYQLHQGLWHLFPNRPDAARD-------FLFHVEKRNTPEGChVLLQSAQMPvS- 62  Escherichia col...
WP_000281463   1 MYLSRITLHTgqlspAqllhlVDRGEYVMHQWLWDLFPG--GKERQ-------FLYRRE--ELQGAFrFFVLSQERP-A- 67  Escherichia coli
WP_000281411   1 MYLSRIQLRFnnlrpEmlakwNSARPYASHQWLWQLFPE--QELRQ-------FLFREE---AHGG--FFMLSAIPP-Ll 65  Salmonella ente...
4TVX_A        63 TAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQK--RldskgnikrcrVP-----LIKEAEQIAWLQRk--LGNA 133 Escherichia col...
WP_010933630  73 QPAHGELVSRPVPEEFLQHRFYKFEVTLNPTRKENKSGK--R-----------VP-----IKTREEVAAWFGGksqTSWG 134 Chlorobaculum t...
Q46897        63 TAVATVIKTKQVEFQLQVGVPLYFRLRANPIKTILDNQK--RldskgnikrcrVP-----LIKEAEQIAWLQRk--LGNA 133 Escherichia col...
WP_000281463  68 ESETFTIECRSFVPELRTGQQLCFNLRANPTICKAGKRHdlLmeakrqvrgqaEGsd-vwLHQQQAALDWLAAqgeRSGF 146 Escherichia coli
WP_000281411  66 QHSLFLIETKLFNPQLTNGLELDFQLRANPVITRNGKRSdvMmnakhqakangVEkerwwELQQQAAQAWLEQqgqQHGF 145 Salmonella ente...
4TVX_A       134 ARVEDVH--------------------PISERPQYFs--GDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGC 191 Escherichia col...
WP_010933630 135 FSVDPARl------------------dVRMLPVMQFs-kQGDRTVTHGAARVSGMLRVENRDLFIESFNKGIGRGRAFGF 195 Chlorobaculum t...
Q46897       134 ARVEDVH--------------------PISERPQYFs--GDGKSGKIQTVCFEGVLTINDAPALIDLVQQGIGPAKSMGC 191 Escherichia col...
WP_000281463 147 TLLDTS---------------------VDAYRQQQLrreNSRQLIQFSSVDYTGMLTVTDPGLFLQRLSQGYGKSRAFGC 205 Escherichia coli
WP_000281411 146 RLIAPEPddfamwagdeyselqahcgcVQAYQQHRFvrkDQETPITFSSVDFSGALCITDAALFKQALFSGLGKSKALGC 225 Salmonella ente...
4TVX_A       192 GLLSLAPL 199 Escherichia coli K-12
WP_010933630 196 GLLQIEPL 203 Chlorobaculum tepidum
Q46897       192 GLLSLAPL 199 Escherichia coli K-12
WP_000281463 206 GLMLIKPG 213 Escherichia coli
WP_000281411 226 GMLMVKRK 233 Salmonella enterica
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