2OEB,4GKF


Conserved Protein Domain Family
cas_Cmr5
?
TIGR01881: cas_Cmr5 
Click on image for an interactive view with Cn3D
CRISPR type III-B/RAMP module-associated protein Cmr5
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model family, represented by TM1791.1 of Thermotoga maritima, is found in both archaeal and bacterial species as part of the 6-gene CRISPR RAMP module.
Links
?
Statistics
?
PSSM-Id: 273851
Aligned: 8 rows
Threshold Bit Score: 99.4771
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
Download Cn3D
PubMed ReferencesClick to see Conserved Features Help
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection: 
2OEB_A         7 EQERASFAFKVVSDIKD-KysqnkkvQGKYSSYAEKAPTIILNNGLGATLAFFLSKLEKpiddvdyksinp-------es 78  Archaeoglobus f...
WP_010880203   5 IQKVVKFAYGCVNEVKG-Req----iEEKYASYVRKLPSMIIHNGLLPTVAFIRSKAGIdaqnkls-------------- 65  Aquifex aeolicus
P58011        14 SLELAKLAMNLVEEVEK-Dk------RDDYLRDVKGLGSMIVQNGLMGTILFLKKKGKN--------------------- 65  Thermotoga mari...
4GKF_A        19 EQRRGEYAYYVIKEVADlNdk---qlEEKYASLVKKAPVMILSNGLLQTLAFLLAKAETspekanqilsrvneypprfie 95  Pyrococcus furi...
WP_011026627  11 EQERASFCLKEIEELPK-Gkd----kRDKYKTNARRLPAFIVSNGLIPTLAFYKSKEETk-------------------- 65  Caldanaerobacte...
WP_010980047   1 MVEGVKLAISIFPKVIL-Qlkd-netLKLFRSRCRDFPEETLNSGFVPTFLFYLSKSDLctlvkfvnylnnggs-dikig 77  Sulfolobus toko...
WP_010896512   5 DAHYANIALQSIQELEK-Sde---afKTSFGSLCHQFPSMVRLNGLRLTVAFYESKKEN--------------------- 59  Bacillus halodu...
WP_009992995   6 EEKDYKLAIEAFNLVYNaLdk---kaREKFRSRARDMVEEIYTSGFIPTLFYIISKAGLennndkltallnsps-sksid 81  Sulfolobus solf...

2OEB_A        79 fgnaeniayaFLYKHLSTWLAEGNGKDsafsg-----------ltngeDPLKYIMEKTAIDVA---ISTEEALSILNWIK 144 Archaeoglobus f...
WP_010880203  66 ---pekeawkKIENHIKNYLIKIENVEvp------------------dSLTRLFAEMDFSRYR---LYTQKILFFTQWLK 121 Aquifex aeolicus
P58011        66 ----------KVVDHLGKMIEHLTLED---------------------GIVERLMENEFLDARtylKAQIAALECAKWLK 114 Thermotoga mari...
4GKF_A        96 klgndkdehlLLYLHIVYWLRENVDRN---------------------IDVKTLLSQDYSKVL---WATKEAIALLNWMR 151 Pyrococcus furi...
WP_011026627  66 ----------pVYDTLNKWLQKRGYISen------------------kDALDELVDKDFQILR---LATTEILALANWLK 114 Caldanaerobacte...
WP_010980047  78 nlrstetsytVYSALILYFLTNEELKEkflkeinldelcpknnvtqsaNALMHLLNNLYSNSS---IVTLLMKDYLLTLK 154 Sulfolobus toko...
WP_010896512  60 ----------TAHARYLAGLKAALGVS---------------------ISANDIPERGAEYRR----MTEQALRASIWFK 104 Bacillus halodu...
WP_009992995  82 lgssdeasymAYLFVILYYLSERNIINkefli------------nklkNNRLELIDKLYELSP---IISARIKRYLMAIK 146 Sulfolobus solf...

2OEB_A       145 KFAKAMLEE 153 Archaeoglobus fulgidus DSM 4304
WP_010880203 122 RVAEGELKS 130 Aquifex aeolicus
P58011       115 RCGEVLLGG 123 Thermotoga maritima MSB8
4GKF_A       152 RFAVAMLKE 160 Pyrococcus furiosus DSM 3638
WP_011026627 115 RTVEIEIKE 123 Caldanaerobacter subterraneus
WP_010980047 155 RLAEALINV 163 Sulfolobus tokodaii
WP_010896512 105 RYAEAILKC 113 Bacillus halodurans
WP_009992995 147 RLAEALIEV 155 Sulfolobus solfataricus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap