Conserved Protein Domain Family
cas_Csa5

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TIGR01878: cas_Csa5 
CRISPR type I-A/APERN-associated protein Csa5
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents a minor family of Cas protein found in the (all archaeal) APERN subtype of CRISPR/Cas locus, so the family is designated Csa5, for CRISPR/Cas Subtype Protein 5.
Statistics
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PSSM-Id: 273849
Aligned: 6 rows
Threshold Bit Score: 58.6483
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
BAB67758      22 VFIYSESPTYVDRFAnALSKEAVAR-VIYESQRIIQMgissgevkmgnVEISGKsmkitdkkgeesypaviikTKEGRNY 100 Sulfolobus toko...
O28409        17 LVAEQGSYTYVDKLG-YVPSKDLAVfYLKEALRDLHS-----------IQQKEK-------------------FENEKAR 65  Archaeoglobus f...
WP_010868144  24 FFVRIKNFGYVDRIGnALTPEPVEI-ALHEAMRAFRSiwe-----gakTDEEGRry----------------iEKDGE-K 80  Pyrococcus abyssi
WP_010885012  18 FFVQMKNFSYVDRIGnALNPETVEV-ALFETIRAFRSvre-----sasIDKEGRry----------------vEKDG-NK 74  Pyrococcus hori...
WP_010923715  10 GFLYSESPTLVDRFAnALSKEAVTK-VLYDVQRIVQMgidrgeivsttTMIQGKeypa-----------vnvsSSEGK-Y 76  Sulfolobus solf...
WP_012546006 342 NLLYPETVRYLLKEVaMISLEIIENpALGSLARTLRYfirekkygyadDIRNARkesrdfe------etiakmLREGRLR 415 Thermodesulfovi...
BAB67758     101 IVVG---YLPTDKDVEDFMS-LVERDIYYAR-KA-GALAMSIANR 139 Sulfolobus tokodaii str. 7
O28409        66 ELVGkidYERVEKELEDIAKtDERKELREKTsLI-AAKALALSAK 109 Archaeoglobus fulgidus DSM 4304
WP_010868144  81 IYLP---KIPSDTEIESFLN-EVRRDIRIAK-RV-ATLALAYPKE 119 Pyrococcus abyssi
WP_010885012  75 ILVP---GIPRDEEVEKFLE-DVRSNIGVAK-LV-ATLALAYPSK 113 Pyrococcus horikoshii
WP_010923715  77 TVVG---YLPTNQDIEYFLR-MIEEDVYYAR-KA-GALAMSIANR 115 Sulfolobus solfataricus
WP_012546006 416 LEQKeqiHLPTDEEVKKVFR-LANEDFESTK-LAlVMLAFSFPSR 458 Thermodesulfovibrio
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