4P6I


Conserved Protein Domain Family
cas_CT1978

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TIGR01873: cas_CT1978 
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CRISPR-associated endoribonuclease Cas2, subtype I-E/ECOLI
CRISPR is a term for Clustered, Regularly Interspaced Short Palidromic Repeats. A number of protein families appear only in association with these repeats and are designated Cas (CRISPR-Associated) proteins. This model represents a minor branch of the Cas2 family of CRISPR-associated endonuclease, whereas most Cas2 proteins are modeled instead by TIGR01573. This form of Cas2 is characteristic for the Ecoli subtype of CRISPR/Cas locus.
Statistics
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PSSM-Id: 233610
Aligned: 5 rows
Threshold Bit Score: 126.458
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
4P6I_A         3 MLVVVTENVPPRLRGRLAIWLLEVRAGVYVG-DVSAKIREMIWEQIAGL---AEEGNVVMAWATNTETG-FEFQTFGLNR 77  Escherichia col...
P45956         3 MLVVVTENVPPRLRGRLAIWLLEVRAGVYVG-DVSAKIREMIWEQIAGL---AEEGNVVMAWATNTETG-FEFQTFGLNR 77  Escherichia col...
ZP_00014072    2 MMVIVVENAPPRLRGRLALWLAEIRAGVYVG-VYSRRVRERIWDEVTQM---IDKGSAVITWSAPTDSG-FAFEAVGENR 76  Rhodospirillum ...
WP_010933634   1 MLVVVANDLPPAVRGRMKLWFIEPRANVFVS-GVRDSLARKVVDYLHQHc--PPKSGLMIFNSSNTCPG-YEIFGLGDTR 76  Chlorobaculum t...
ZP_00014244    3 MVVVVTRNVEARYRGFLGSAMLELAPGVYAQpRMNAGVRQRIWEVLAQWyghLRQGSIVMTWADSLANGgLGLATLGEPP 82  Rhodospirillum ...
4P6I_A        78 RTPVDLDGLRL 88  Escherichia coli K-12
P45956        78 RTPVDLDGLRL 88  Escherichia coli K-12
ZP_00014072   77 REPVEIDGLTL 87  Rhodospirillum rubrum
WP_010933634  77 KEITEISGLPL 87  Chlorobaculum tepidum
ZP_00014244   83 KDIVAHDGILL 93  Rhodospirillum rubrum
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