Conserved Protein Domain Family
type_I_sec_PrtD

?
TIGR01842: type_I_sec_PrtD 
type I secretion system ABC transporter, PrtD family
Type I protein secretion is a system in some Gram-negative bacteria to export proteins (often proteases) across both inner and outer membranes to the extracellular medium. This is one of three proteins of the type I secretion apparatus. Targeted proteins are not cleaved at the N-terminus, but rather carry signals located toward the extreme C-terminus to direct type I secretion. [Protein fate, Protein and peptide secretion and trafficking]
Statistics
?
PSSM-Id: 200134
Aligned: 8 rows
Threshold Bit Score: 760.347
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
Q03024        16 LAASRGALRSVAAFSGVINLLMLVPSLYMLQVYDRVLSSANEVTLLMLTLMALGVFVFMGALEALRSFVLVRVSERFDGQ 95  Pseudomonas aer...
P23596        15 LRQFRRSFWSVGIFSAVINVLMLAPSVYMLQVYDRVLASGNGITLLMLTLLMAGLCAFMGALEWVRSLLVVRLGTRIDLA 94  Erwinia chrysan...
WP_004599398  17 LSECKTAFWIVFWFAFVINLLMLITPLYSLQVLDRVLGSGNLQTLLFLSIIIAYIYFVYGLLQIARSFTLIKVGEWLDKT 96  Rickettsia prow...
WP_010880685  15 LAKYKKTLIIVGLFSLFINILFLLPSIYMLAVYDIVVPSTSVPTLLVITALAVVLYFALGLLQSVRAKVMQIISLKLDSE 94  Aquifex aeolicus
WP_006315232 178 IAAVRRNMVVVMLFTVAINILLLAIPLYLFQISDRVLTSRSMDTLVMLTVAVLGAVLLQAFMDAIRRFILMRTAVELEVQ 257 Agrobacterium s...
WP_010972990  19 VSPLKSTFLGVALVSGVVNILALTSPLFMLQVYDRVLASGSLPTLVGLALLALGLYGFQCLLDIIRARVLIRIGEDFDMR 98  Agrobacterium f...
WP_010918892  16 VLVARPAVITAMVFSFFINILALVSPLYMLQVYDRVLTSRNVSTLIVLTVICVFLFLVYGLLEALRTQVLVRGGLKFDGV 95  Caulobacter vib...
WP_010972503   8 LTKNKSTFFAVGLASALMNILNLSGSLFMLEVYDRILPSKSIPSLVALVVLLIVLYAFLMGFDALRGRILARISDNMDDA 87  Agrobacterium f...
Q03024        96 LHGRIYAAAFERNL-RAGGQEASQALHDLTTLRQFITGQALFAFFDAPWFPVYLLVIFLFDPWLGLLSLVGALALMALAW 174 Pseudomonas aer...
P23596        95 LNQDVFNAAFARNL-EAGDGRAGLALTDLTLLRQFITGNALFAFFDVPWFPLFLLVLFLLHPWLGMLALGGTVVPGGVGL 173 Erwinia chrysan...
WP_004599398  97 VAPVIFASSISATA-TRVNIGSSQLLRDFQAVKTFLTSTGINTLFDAPWSIIYIAVIFSIHPYIGFITVFGAIIIVSTAF 175 Rickettsia prow...
WP_010880685  95 LNKEVFTSSFEYAI-RNPSKASAQPINDLYQLKQFLTSPVLFAIFDLPWVPIYFGVLFVFHVYYGVMAILSMAVIVALAI 173 Aquifex aeolicus
WP_006315232 258 LGAPILSAAARASL--HGSGKDYQTLQDLQQLRSFLTSGTLIAFLDAPLMPLFIVVVYLVHPHLGIIIMVCCVVLFGIAW 335 Agrobacterium s...
WP_010972990  99 YSGRVHDAVVRLPLvNRMPGDGLQPLRDLDNVRGFLSGTGPTAFFDLPWMPLYLGLCFLFHVWIGVTALAGAVLLVSLTI 178 Agrobacterium f...
WP_010918892  96 ARDPIFKSVLDSTL-SR-KGIGGQAFRDMDQVREFMTG-GLIAFCDAPWTPVFVIVSWMLHPFFGILAIIACIIIFGLAV 172 Caulobacter vib...
WP_010972503  88 LNQKLFRASISAPLlASSKIDGLQIVGDLDQIRQFLSGPGPAAFFDIPWLPIYLLICFALHPWIGFAVLGGAVVLVVLTL 167 Agrobacterium f...
Q03024       175 FNERATRAPLAKAGELSIKSGQLASNNLRNAEVIEAMGMLGSMRGRWERLHQAFLDQQSLASERAARINALSKYLRIALQ 254 Pseudomonas aer...
P23596       174 AEPASDQSTAGGSNQQSQQATHLADAQLRNADVIEAMGMLGNLRRRWLARHYRFISLQNLASERAAAVGGASKYSRIALQ 253 Erwinia chrysan...
WP_004599398 176 FNAAATNKTLGEATEFSIKGMTQADIANRNAESIEAMGMMKNVTKNWHKFNILALDKQSVASYRNGVISNFSRFVRNIMQ 255 Rickettsia prow...
WP_010880685 174 LNEYITKKKLKESNELLVRSTNFLNRALLNAEVVEALGMRNNLYKKWMNFYSKHLSAFEEATDRNNFLSNLTRIFRIMAQ 253 Aquifex aeolicus
WP_006315232 336 LNQRFTARQFSEASGYLSRANFHLDSMSRNSQIINALAMIPEAVKMWGRETAGSLKSHVAAQDRNIMFSGVSKAARMVTQ 415 Agrobacterium s...
WP_010972990 179 LTNIFSQKPIRDTMVENMARNRQLEASRRNAEVVQAMGLGRRLGKRWQSSNEAYLAANRKAGDVAGGLGNLAKSLRVVLQ 258 Agrobacterium f...
WP_010918892 173 MNDNATKNPIQMATMASIAAQNDAGSTLRNAEVMKAMGMWGGLQARWRARRDEQVAWQAAASDAGGAVMSGIKVFRNIVQ 252 Caulobacter vib...
WP_010972503 168 LTNWLTERATKQAYTARGQRNVLVGSSQRNIESIKTMGMMGAVTSMWDELHSKYRSVTLSTSDTAGMLGAMSRTFRLLLQ 247 Agrobacterium f...
Q03024       255 SLVLGLGAWLAVEGR---ITPGMMIAGSILMGRALGPIDQLIGVWKQWGAARDAYRRLSGLLDEFPARERR-MELPEPRG 330 Pseudomonas aer...
P23596       254 SLMLGLGALLAIDGK---ITPGMMIAGSILVGRVLSPIDQLIGVWKQWSSARIAWQRLTRLIAAYPPRPAA-MALPAPEG 329 Erwinia chrysan...
WP_004599398 256 MAVTGVGAYIVVKSHsadMTPGNMIMSSIIVGRALAPFDNAIELWKSMSGAIKSYKNINNLFNNYSSRDEA-MPIPNVNG 334 Rickettsia prow...
WP_010880685 254 SLMLGLGGYLAIKHE---ITTGMIVAGSILLGRILGPIDTIVNGWRQIGNTKVAYTRLNEFLKFLRFKREVsVKLPEPKG 330 Aquifex aeolicus
WP_006315232 416 IALLGWGAHLSLSGE---LTGGMVIAASIISGRALAPIEGAIEGWHQFNKSAASYGRIKQLLINSPLNFPR-LRLPNPEG 491 Agrobacterium s...
WP_010972990 259 SAILAVGAWLVIRQE---ASGGVMIASSIMMGRALAPVDLAISNWKSFVAARQSWARLRELFAQMPANAAA-MALPKPEK 334 Agrobacterium f...
WP_010918892 253 TLILGGGAYLAIDGK---ISAGAMIAGSILVGRALAPIEGAVGQWKNYIGARGAWDRLQTMLREEKSADDH-MPLPEPRG 328 Caulobacter vib...
WP_010972503 248 SGVMAIGAVLVIDGH---ASAGSIIAGSILSAKALGPVEHAIANWRSFMTARQGWKRVNEFLELVPEPAPP-LSLPRPQF 323 Agrobacterium f...
Q03024       331 HLLLESLDAAPPGSEa--------RTLRGLTLAIPAGSVVGVIGPSGSGKSSLARVVLGIWPTLHGSVRLDGAEIRQYER 402 Pseudomonas aer...
P23596       330 HLSVEQVSLRTAQGN---------TRLQNIHFSLQAGETLVILGASGSGKSSLARLLVGAQSPTQGKVRLDGADLNQVDK 400 Erwinia chrysan...
WP_004599398 335 HLTVENVYYAHPIPKhwsqpivpkYILKGISFAVQPGEILAIIGPSATGKSTLAKIIVGVWKESSGSVRLDSAEIYRWNR 414 Rickettsia prow...
WP_010880685 331 EIELSNVVVVPPEGKt--------PVLRNINMRILPGEFVAIIGPSGSGKSSLVRTILGIWLPVHGTVEIDGADLKQWDR 402 Aquifex aeolicus
WP_006315232 492 RLDVERILFVPPPQKk--------VILNGISFSLKKGESLAIIGNSGSGKTTLGKMLVGSILPTSGNVRLDLMDLRNWDQ 563 Agrobacterium s...
WP_010972990 335 ELRVENVTIVPPGERk--------PTVTGLGFVVTAGNALGIIGPSGSGKSTLARILTGAWMPAAGKVRLDGASFDQWDR 406 Agrobacterium f...
WP_010918892 329 VLSAEAASILPPGAQq--------PTMRQASFRIDAGAAVALVGPSAAGKSSLLRGIVGVWPCAAGVIRLDGYDIKQWDP 400 Caulobacter vib...
WP_010972503 324 TVAVDRVTGGPPNGAr--------DTVADISFTLNAGDGLGIIGPSASGKSTLARLMTGIWPYERGSVRFDGAALNQWDF 395 Agrobacterium f...
Q03024       403 ETLGPRIGYLPQDIELFAGTVAENIARFGE-VQADKVVEAARLAGVHELVLRLPQGYDTVLGVGGAGLSGGQRQRIALAR 481 Pseudomonas aer...
P23596       401 NTFGPTIGYLPQDVQLFKGSLAENIARFGD-ADPEKVVAAAKLAGVHELILSLPNGYDTELGDGGGGLSGGQRQRIGLAR 479 Erwinia chrysan...
WP_004599398 415 EDFGKHVGYLPQGIELFSGSIKQNIARMEEnADPQKVIEAAKIAGAHEMILRFPDGYDSDIGPAGSNLSGGQRQRIGLAR 494 Rickettsia prow...
WP_010880685 403 DYFGKFVGYLPQDIELFEGTVAENIARFGE-LDSEKIIEAAKLSGAHDVIIKLPDGYDTYIGPGGITLSGGQRQRIALAR 481 Aquifex aeolicus
WP_006315232 564 RQFGESIGYLPQDVQLFPGTIKANICRMRDdVEDRQIYEAAVLADVHELIAGFPQGYETVVAADGAPLSGGQKQRIALAR 643 Agrobacterium s...
WP_010972990 407 ETLGRHIGYLPQGVELFDGTIGENISRFDDnPDPEAIIAAARAAGAHELILRFEKGYDSDIGEAGSTLSAGQRQRIGLAR 486 Agrobacterium f...
WP_010918892 401 EKLGRHVGYLPQDIELFSGTVAQNIARFTE-FESQEVIEAATLAGVHEMIQSLPMGYDTAIGEGGASLSGGQRQRLALAR 479 Caulobacter vib...
WP_010972503 396 EFLGKSIGYMPQQVELMPGTVAQNIARFDRnATAESIVAAAKAAQVHELILNLPNGYDTSIGDRGEALSGGQKQRIGLAR 475 Agrobacterium f...
Q03024       482 ALYGAPTLVVLDEPNSNLDDSGEQALLAAIQALKARGCTVLLITHRAGVLGCADRLLALNAGQLHLYGERDQVLAAL 558 Pseudomonas aerugi...
P23596       480 AMYGDPCLLILDEPNASLDSEGDQALMQAIVALQKRGATVVLITHRPALTTLAQKILILHEGQQQRMGLARDVLTEL 556 Erwinia chrysanthemi
WP_004599398 495 AFYGNPKLIILDEPNANLDEEGEIALASALKQAKLKRISVLVISHRPSVLSVVDKILILQDGAIAVYGTGEEIKKHF 571 Rickettsia prowazekii
WP_010880685 482 ALYGNPRIVILDEPDSNLDEQGEQALYNALIELKKRKVTTIIVSHRIRLLNLVDKIAIMQDGTLKAFGKADIIIQKL 558 Aquifex aeolicus
WP_006315232 644 AFFGDPKFVVLDEPNSNLDTAGEQALARALLHAKKQGITTVTITQRPALLQCVDKIMVLKDGSVAMFGERMDVLKAL 720 Agrobacterium sp. ...
WP_010972990 487 ALYGDPFIVVLDEPNANLDAEGEAAVVKAITSVKARGGIAVVVAHRPSAIGAVDYILMMEDGRMKAFGPRDEVLSKV 563 Agrobacterium fabrum
WP_010918892 480 AVFRMPALLVLDEPNASLDQVGEVALMEAMKRLKAAKRTVIFATHKVNLLAQADYIMVINQGVISDFGERDPMLAKL 556 Caulobacter vibrio...
WP_010972503 476 ALFGEPFFVLLDEPNSNLDSEGEAALRNAIGDIRARGGIVVVIAHRPSALESINMVMVMSNGRMLRFGTKEEVLAQI 552 Agrobacterium fabrum
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap