4HP8


Conserved Protein Domain Family
kduD
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TIGR01832: kduD 
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2-deoxy-D-gluconate 3-dehydrogenase
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. [Energy metabolism, Biosynthesis and degradation of polysaccharides]
Links
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Statistics
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PSSM-Id: 188170
Aligned: 8 rows
Threshold Bit Score: 401.83
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
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Sequence Alignment
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Format: Row Display: Color Bits: Type Selection: 
4HP8_A         5 FSLEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAA-RRAPDETLDIIAKDGGNASALLIDFADPLAAK---DSFTDAG- 79  Agrobacterium f...
Q05528         6 FNLQGKVALITGCDTGLGQGMAVGLAEAGCDIVGVN-IVEPKETIEKVTAVGRRFLSLTADMSDISGHAalvEKAVAEFg 84  Dickeya dadanti...
P50842         8 FSLKGKTALVTGPGTGIGQGIAKALAGAGADIIGTShTSSLSETQQLVEQEGRIFTSFTLDMSKPEAIK---DSAAELFe 84  Bacillus subtil...
WP_002209883   4 FDLNGKVAIITGCNTGLGQGMAIGLAKAGADIVGVG-VAEAPETQAQVEALGRKFHFITADLIQQKDIDsivSQAVEVMg 82  Yersinia pestis
WP_010898324   4 FSLEGKIALVTGASRGLGQGMAVGLAEAGADVIGAG-ISDMSETRQQIESLGRTFYELKADLFEEGAGKqliADAIEKAg 82  Bacillus halodu...
WP_010912148  11 FSLAGKRILVTGANTGIGQGIVLSIARAGGVVIGVG-RSSMDETASKVAAIGARFETVSADLADTATAGpmlDRVWDESg 89  Mesorhizobium loti
WP_010919366   5 FSLEGKVALITGANTGIGQGIAIALAAAGADIAAAG-RSAPTETQAAVEALGRKFLSIKADFSSIEPVQrvvDETVAAFg 83  Caulobacter vib...
P37769         6 FSLEGKVAVVTGCDTGLGQGMALGLAQAGCDIVGIN-IVEPTETIEQVTALGRRFLSLTADLRKIDGIPallDRAVAEFg 84  Escherichia col...

4HP8_A        80 ---FDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG---RSGKVVNIASLLSFQGGIRVPSYT 153 Agrobacterium f...
Q05528        85 --kVDILVNNAGIIRREDAIEFSEKNWDDVMNLNIKSVFFMSQTVARQFIKQG---HGGKIINIASMLSFQGGIRVPSYT 159 Dickeya dadanti...
P50842        85 nrqIDILVNNAGIIHREKAEDFPEENWQHVLNVNLNSLFILTQLAGRHMLKRG----HGKIINIASLLSFQGGILVPAYT 160 Bacillus subtil...
WP_002209883  83 --hIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQG---NGGKIINIASMLSFQGGIRVPSYT 157 Yersinia pestis
WP_010898324  83 --rIDILVNNAGIIRRNEAEAFTDKDWNDVINVNLNAVFQMCREAGNHMIENG----FGRIINIASMLSFQGGLRVPAYT 156 Bacillus halodu...
WP_010912148  90 --pLDGLVNNAGIIRRADAVDLTETDWDDVMDVNLKTVFLLCQSFARRALADG---RRGKIVNIASVLSFQGGIRVASYT 164 Mesorhizobium loti
WP_010919366  84 --kVDILVNNAGIIRRADSIEFSEADWDAVMDTNLKVVFFLTQAFAKQALKQGfegGQAKVINIASLLSFQGGIRVPSYT 161 Caulobacter vib...
P37769        85 --hIDILVNNAGLIRREDALEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQG---NGGKIINIASMLSFQGGIRVPSYT 159 Escherichia col...

4HP8_A       154 AAKHGVAGLTKLLANEWAAKGINVNAIAPGYIETNNTEALRADAARNKAILERIPAGRWGHSEDIAGAAVFLSSAAADYV 233 Agrobacterium f...
Q05528       160 ASKSAVMGITRLLANEWAKHNINVNAIAPGYMATNNTQQLRADQDRSKEILDRIPAGRWGLPQDLQGPAVFLASSASDYV 239 Dickeya dadanti...
P50842       161 ASKHAVAGLTKSFANEWAASGIQVNAIAPGYISTANTKPIRDDEKRNEDILKRIPAGRWGQADDIGGTAVFLASRASDYV 240 Bacillus subtil...
WP_002209883 158 ASKSAVMGLTRALATELSQYNINVNAIAPGYMATDNTAALRADTARNEAILERIPASRWGTPDDLAGPAIFLSSSASDYV 237 Yersinia pestis
WP_010898324 157 ASKHAIAGLTKSLANEWSKKGVNVNAIAPGYMVTDNTAALRADEVRNAYITSRIPKGEWGTPADLKGPVVFLASEASSYV 236 Bacillus halodu...
WP_010912148 165 ASKHGVLGITRLLACEWAAKGINVNAIAPGYVETNNTQALRADPDRSAAILGRIPAGRWGEPSDIGDAAVFLLARASDYM 244 Mesorhizobium loti
WP_010919366 162 ASKSGLAGLTKILANEWATKGINVNAIAPGYFDTNNTEALRADQDRNAAILARIPAGRWGRPEDIGGAAVFLASSASDYV 241 Caulobacter vib...
P37769       160 ASKSGVMGVTRLMANEWAKHNINVNAIAPGYMATNNTQQLRADEQRSAEILDRIPAGRWGLPSDLMGPIVFLASSASDYV 239 Escherichia col...

4HP8_A       234 HGAILNVDGGWLAR 247 Agrobacterium fabrum str. C58
Q05528       240 NGYTIAVDGGWLAR 253 Dickeya dadantii 3937
P50842       241 NGHILAVDGGWLSR 254 Bacillus subtilis subsp. subtilis str. 168
WP_002209883 238 TGYTLAVDGGWLAR 251 Yersinia pestis
WP_010898324 237 NGHILCVDGGWMSS 250 Bacillus halodurans
WP_010912148 245 HGAAVPVDGGWLAR 258 Mesorhizobium loti
WP_010919366 242 QGITLPVDGGWLAR 255 Caulobacter vibrioides
P37769       240 NGYTIAVDGGWLAR 253 Escherichia coli K-12
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