4MM1,2F6U


Conserved Protein Domain Family
GGGP-family

?
TIGR01768: GGGP-family 
Click on image for an interactive view with Cn3D
geranylgeranylglyceryl phosphate synthase family protein
This model represents a family of sequences including geranylgeranylglyceryl phosphate synthase which catalyzes the first committed step in the synthesis of ether-linked membrane lipids in archaea. The clade of bacterial sequences may have the same function or a closely related function. This model supercedes TIGR00265, which has been retired.
Statistics
?
PSSM-Id: 273794
Aligned: 7 rows
Threshold Bit Score: 301.71
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
4MM1_A        19 IHLTLIDPEEqt-pEEAVEIARAAIRGGTDGIMLGGSTTDS-SELDNTARALReNIDVPIILFPGNTTGVSRYADAIFFM 96  Methanothermoba...
Q9KF39         9 RHVFKLDPNK----ELNDDDLEAICESGTDGILVGGSDGVTlDNTLQLLARIR-RFSVSCALEVSNLESITPGFDHYFIP 83  Bacillus halodu...
O29844         7 RHITKLDPDR----TNTDEIIKAVADSGTDAVMISGTQNVTyEKARTLIEKVS-QYGLPIVVEPSDPSNVVYDVDYLFVP 81  Archaeoglobus f...
WP_014511517  21 LHFSLIDPFKinssDELKYITKNLYNAGTDAFLIGGTLGVSkDKLDFVISLLD-DYEIPKIIFPSNINLLSEKADALLFM 99  Sulfolobus solf...
O26652        16 IHLTLIDPEEqt-pEEAVEIARAAIRGGTDGIMLGGSTTDS-SELDNTARALReNIDVPIILFPGNTTGVSRYADAIFFM 93  Methanothermoba...
WP_010865869  21 LHFTLIDPDKtg-pGEAGEIAARAAEAGSDAILVGGSIGVTfEETDGVVKAAK-RSGLPVILFPGGHTNASRHADAVLFL 98  Aeropyrum pernix
2F6U_A        10 RHITKLDPDRt----nTDEIIKAVADSGTDAVMISGTQNVTyEKARTLIEKVS-QYGLPIVVEPSDPSNVVYDVDYLFVP 84  Archaeoglobus f...
4MM1_A        97 SLLNSTNPYWIIG-------AQALGAATVKKMG--IEALPMGYLVVEPGGTVGWVGDTKPVpRNKPDIAAAYAMAAEFLG 167 Methanothermoba...
Q9KF39        84 SVVNSGEVKWISG-------LHHEAVKEFGPIMnwDEIVMEGYCIMNPDSKAATLTSAKTD-LANEDVVAYARMVENMYQ 155 Bacillus halodu...
O29844        82 TVLNSADGDWITGkhaqwvrMHYENLQKFTEIIesEFIQIEGYIVLNPDSAVARVTKALCN-IDKELAASYALVGEKLFN 160 Archaeoglobus f...
WP_014511517 100 SLLNSDDIYYIIG-------AQIVAAPIIKMLQ--MEVIPTAYVIVGHGGTAAHIGKARVIpYDNFELATAYTLAAEYLG 170 Sulfolobus solf...
O26652        94 SLLNSTNPYWIIG-------AQALGAATVKKMG--IEALPMGYLVVEPGGTVGWVGDTKPVpRNKPDIAAAYAMAAEFLG 164 Methanothermoba...
WP_010865869  99 TVMNSDNPYYIVQ-------AQILGAPLALKLG--LEAIPTSYIIVGYGGAAGFVARARPIpYEKPELAALHALAGAMMG 169 Aeropyrum pernix
2F6U_A        85 TVLNSADGDWITGkhaqwvrMHYENLQKFTEIIesEFIQIEGYIVLNPDSAVARVTKALCN-IDKELAASYALVGEKLFN 163 Archaeoglobus f...
4MM1_A       168 MRLFYLEAGSGAPEhvpEEMIALVKRCTd-------QILIVGGGIRSGEDAARVAGaGADVVVTGTVVENSdnveDKIRE 240 Methanothermoba...
Q9KF39       156 FPVFYLEYSGTFGD---PQLVEEVSQVLt------kTKLFYGGGIRTVEQAEQMAP-FADTVVVGNVIYDDv---QAALA 222 Bacillus halodu...
O29844       161 LPIIYIEYSGTYGN---PELVAEVKKVLd------kARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKg--iDAFLE 228 Archaeoglobus f...
WP_014511517 171 MSFVYLEAGSGAPEpirPEMISFIKN-As------sIPLIVGGGIRSVEVALKLVEaGADIIVTGNIIESDv---NKAIK 240 Sulfolobus solf...
O26652       165 MRLFYLEAGSGAPEhvpEEMIALVKRCTd-------QILIVGGGIRSGEDAARVAGaGADVVVTGTVVENSdnveDKIRE 237 Methanothermoba...
WP_010865869 170 GRIIYLEAGSGAPKpvpPEAVAASRKLVdaagyggeVLLTVGGGVRTPEAARMLAEaGADVLVTGTLAEESp---GKLAD 246 Aeropyrum pernix
2F6U_A       164 LPIIYIEYSGTYGN---PELVAEVKKVLd------kARLFYGGGIDSREKAREMLR-YADTIIVGNVIYEKg--iDAFLE 231 Archaeoglobus f...
4MM1_A       241 IVE 243 Methanothermobacter thermautotrophicus str. Delta H
Q9KF39       223 TIA 225 Bacillus halodurans C-125
O29844       229 TLP 231 Archaeoglobus fulgidus DSM 4304
WP_014511517 241 IIR 243 Sulfolobus solfataricus
O26652       238 IVE 240 Methanothermobacter thermautotrophicus str. Delta H
WP_010865869 247 VVE 249 Aeropyrum pernix
2F6U_A       232 TLP 234 Archaeoglobus fulgidus
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap