1T8R


Conserved Protein Domain Family
AMP-nucleosdse

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TIGR01717: AMP-nucleosdse 
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AMP nucleosidase
This model represents the AMP nucleosidase from proteobacteria but also including a sequence from Corynebacterium, a gram-positive organism. The species from E. coli has been most well studied.
Statistics
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PSSM-Id: 273773
Aligned: 5 rows
Threshold Bit Score: 779.796
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
1T8R_A        10 PAQALDKLDALYEQSVVALRNAIGNYITsGELPDENARkqglFVYPSLTVTWDGSTTN-PpKTRAFGRFTHAGSYTTTIT 88  Escherichia coli
AAL42020      20 PKEAVEALTALYERNTAFLINSFTDLAK-GAPITGRYR----ACYPQVSLETSTFGHV-D-SRLSYGHVTSPGVYTTTIT 92  Agrobacterium t...
CAC25583      14 IDDAIAKLIDIYDTSTKLAKETLN---------NEDYAayadVVYPKLTVDVLEWKPI-D-RTEPFGYVDRAGRYSATLS 82  Corynebacterium...
WP_003119204  23 AEEAVDRLAELHRQATAALSQALKRYIKeRIEPSEAERq--nFHYPQLRIGYRCQGEVpS-TTRAYAKVQVPGEYSVTVT 99  Pseudomonas aer...
P15272        10 PAQALDKLDALYEQSVVALRNAIGNYITsGELPDENARkqglFVYPSLTVTWDGSTTNpP-KTRAFGRFTHAGSYTTTIT 88  Escherichia coli
1T8R_A        89 RPTLFRSYLNEQLTLLYQDYGAHISVQPSQHEIPYPYVID-GsELTLDRSXSA---GLTRYFPTTELAQIGDETADg--I 162 Escherichia coli
AAL42020      93 RPDLFRHYLKEQLGLLIKNHGVPVTVAESATPIPLHFAFGeGaYVEAAAASSLsdvPLRDLFDTPDLNNTDDLIANgeyD 172 Agrobacterium t...
CAC25583      83 KPRVIERYLREQLERLTSNYPCKIYVSESDIRIPPEYIRGaPsATEARRAG-----DVADIIPRPTLDEVHDAIIDgdwH 157 Corynebacterium...
WP_003119204 100 HPDAFRKYLLEQLRPLMDDFTVQVQVGPSQQDIPYPYVVEqGdELAGSGVTAA---ELARVFPSTDLSAASDDIADglyE 176 Pseudomonas aer...
P15272        89 RPTLFRSYLNEQLTLLYQDYGAHISVQPSQHEIPYPYVIDgS-ELTLDRSMSA---GLTRYFPTTELAQIGDETADg--I 162 Escherichia coli
1T8R_A       163 YHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDpDSPYIALSCAGGNWITAE 242 Escherichia coli
AAL42020     173 QVPGEPAPLAPFTAQRIDYSLARLSHYTATSASHFQNFVLFTNYQFYIDEFAAWARKLMADgGEGYTEFVEPGNIVTLAG 252 Agrobacterium t...
CAC25583     158 AFNGPELPLFHFGPQRFDIACARIEHYTGINVEHVQKYILFTNYAMHTTEFVHFAMSELTSeDSRYVGLSLPNGQVIDRE 237 Corynebacterium...
WP_003119204 177 WERADQLPLALFDAARVDFSLRRLVHYTGSDWRHVQPWILLTNYHRYVDQFIRLGLTRLRE-DPRFVRMVLPGNVIIERG 255 Pseudomonas aer...
P15272       163 YHPTEFSPLSHFDARRVDFSLARLRHYTGTPVEHFQPFVLFTNYTRYVDEFVRWGCSQILDpDSPYIALSCAGGNWITAE 242 Escherichia coli
1T8R_A       243 TEAPEEa--iSDLAWKKHQXPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLXIGHCGGLRESQAIGDYVL 320 Escherichia coli
AAL42020     253 SDRPTT----DMTLARLPQMPAYHLKKKGHAGITLVNIGVGPSNAKTITDHIAVLRPHAWLMVGHCAGLRNSQRLGDYVL 328 Agrobacterium t...
CAC25583     238 TATSLGt--eTLDLTSRFQMPRYDLITEAGDGITIINIGVGPSNAKTITDCLAVLRPEAWVMIGHCAGMDARMRIGDLIL 315 Corynebacterium...
WP_003119204 256 MDEGEAnaivAGVVWHRYQMPAYHLIAADGDGITLVNIGVGPSNAKNITDHLAVLRPHCWLMIGHCGGLRQSQTIGDYVL 335 Pseudomonas aer...
P15272       243 TEAPEEa--iSDLAWKKHQMPAWHLITADGQGITLVNIGVGPSNAKTICDHLAVLRPDVWLMIGHCGGLRESQAIGDYVL 320 Escherichia coli
1T8R_A       321 AHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSa-SALRFNLSRA 399 Escherichia coli
AAL42020     329 AHAYVREDHVLDDDLPVWVPIPALAEVQLALEGAVAEVTGYEGFELKRIMRTGTVATIDNRNWELRDQagPVKRLSQSRA 408 Agrobacterium t...
CAC25583     316 GNAYQREDHILNTRIPLGNPIPAIPEIQKALEASVDEIYG--SD--NSLMRTGTVLSTDDRNWEWHTPenLWNWLKGSTA 391 Corynebacterium...
WP_003119204 336 AHAYMRRDGILDRALPPHIPIPALAEVQVALQEAAAEVTGERGESLKRRLRTGTVLTYDDRNWELRWAq-ERPLINLARA 414 Pseudomonas aer...
P15272       321 AHAYLRDDHVLDAVLPPDIPIPSIAEVQRALYDATKLVSGRPGEEVKQRLRTGTVVTTDDRNWELRYSa-SALRFNLSRA 399 Escherichia coli
1T8R_A       400 VAIDXESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLR-AEG-DRLHSRKLRT 477 Escherichia coli
AAL42020     409 IALDMESATIAANGFRFRVPYGTLLCVSDKPLHGELKLPGMATEFYRTQVAQHLQIGIRAVQKLA-AMQkETLHSRKLRS 487 Agrobacterium t...
CAC25583     392 AAVDMESSTLATNGYRFRIPYGTLLSVSDLPLHAVPKLSAQAQAFYFNSKEAHVMCAVRAMEYLAvDPErLRTRKLR-RT 470 Corynebacterium...
WP_003119204 415 IAVDMESGTIAAQGYRLRVPYGTLLCVSDKPLHSEIKLPGSANAFYERAVNQHLRIGIAALDLLR-SQL-NSLHSRKLRS 492 Pseudomonas aer...
P15272       400 VAIDMESATIAAQGYRFRVPYGTLLCVSDKPLHGEIKLPGQANRFYEGAISEHLQIGIRAIDLLR-AEG-DRLHSRKLRT 477 Escherichia coli
1T8R_A       478 FNEPPFR 484 Escherichia coli
AAL42020     488 FYETAFQ 494 Agrobacterium tumefaciens str. C58
CAC25583     471 LGEVPFR 477 Corynebacterium glutamicum
WP_003119204 493 FDEPPFR 499 Pseudomonas aeruginosa
P15272       478 FNEPPFR 484 Escherichia coli
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