Conserved Protein Domain Family
phage_rep_org_N

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TIGR01714: phage_rep_org_N 
phage replisome organizer, putative, N-terminal region
This model represents the N-terminal domain of a small family of phage proteins. The protein contains a region of low-complexity sequence that reflects DNA direct repeats able to function as an origin of phage replication. The region covered by this model is N-terminal to the low-complexity region. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 130775
View PSSM: TIGR01714
Aligned: 4 rows
Threshold Bit Score: 168.438
Threshold Setting Gi: 12697193
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAL98323       9 YLKLKENFFESDEAIILESMPDGYIYSNILLKLYLRS--LKNDGLLMFNNLIPYNAQMLATITRHQIGTVEKAIQIFRDL 86  Streptococcus p...
CAC28357      10 WIQLTQDFFKSKEMKLLRKIAGGDTHTIIYLKMMLIS--LEDGGCIYYDGLADNLAEEIALMIDENVEDIKITLLFLESK 87  Neisseria gonor...
WP_012951955   6 WIKLSVNMFDDEKIKLLEKMPEGNQMLIVWIRLLALAgkTNDKGRIYLNENVPYTEDMLATLFNRDVGIIRVTLHTLQSF 85  Listeria monocy...
EZH89149       6 WIKLKVGMFDDSKIKYIEALPERDTIITIWVKLLTLSgkYNEQGYIMLSENLPYNEEMLANEFNRPINSIRLAIQTFETL 85  Staphylococcus ...
AAL98323      87 QLIEILDNGAIYMTNIQNFVGKSSTDADRKRIEYAKTKQLE 127 Streptococcus pyogenes MGAS8232
CAC28357      88 GLLTRKNDRDYFLEQVPEMVGSETASARRVRKFRENQLALQ 128 Neisseria gonorrhoeae
WP_012951955  86 GMIQKTENGLIEIENWEKHQNVDGMERVREQTRKRVEKHRE 126 Listeria monocytogenes
EZH89149      86 GMIEKVN-GVIKVTNWEKHQSLDSKAKHKEKNKLRQQRYRE 125 Staphylococcus aureus subsp. aureus 21239
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