Conserved Protein Domain Family
vgr_GE

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TIGR01646: vgr_GE 
Rhs element Vgr protein
This model represents the Vgr family of proteins, associated with some classes of Rhs elements. This model does not include a large octapeptide repeat region, VGXXXXXX, found in the Vgr of Rhs classes G and E.
Statistics
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PSSM-Id: 273730
Aligned: 6 rows
Threshold Bit Score: 580.97
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAD17254      47 MVVERLEAQEGLGQDFRFELTLLA-DSAGLVLADMLGKLLAVSLVKPDG---------TLRWFTGHVAEFSLVgSDPGVA 116 Ralstonia solan...
CAC89364      16 AFPLSFKTQEKVSGNPSYQLVFQV-AEADLDLVSLLGEIIKVRIELPDSa-------gYRTFFTYVIAGADEG-QRQDKF 86  Yersinia pestis...
CAC89614      50 FAVVDFSLNEAFSSPFVLHVGLAS-ADPAVDFSAVLDEDATLSIWREGIl---------QRSITGMIASFEQGnTGFHQT 119 Yersinia pestis...
CAC90297      26 VDVLGFEGHESLSQPFCYDIQFTS-ADKAIGPATMLMHDASLTLAAPMAeafgvtvqqTQRVIQGVVTGFKRLsASKEEC 104 Yersinia pestis...
BAB75019      30 YTVLSITVNQIVNRVPTARIILRDgAAADETFAASEGADLVPGQEVEIAagy---dgsDQKIFQGLIVKHALKvTANGDS 106 Nostoc sp. PCC ...
WP_003147059  21 LQLQRMEGREELGRPFAYELELIS-ENPDLPLDGLLGKPASLALELHDGs---------RRHFHGIVAACSQGsGNGQFA 90  Pseudomonas aer...
CAD17254     117 TYRAVLRPWLWFARARINDRVFRDRSLYQQISEILQDYgAWA--QWRWAVAGEDAPFTMAVQGGgqgESDHNYIYRRLEA 194 Ralstonia solan...
CAC89364      87 VYSLELSTWTWFLMQNRNCRIFQDLNIIDIIEQVFSKY-NFA--DYRFDIVGNYRLREYCVQFA---ETDFDFVNRLMED 160 Yersinia pestis...
CAC89614     120 RYSMVIRPALWRTSLRRNSRIFQLESVEAIISTLLKEN-GIN--DFAFGFRHSHPAREFCVQYQ---ESDFDFIQRLTAE 193 Yersinia pestis...
CAC90297     105 RYELSLQPRLALLSRSHQNGIYQDMSVPQIVEKILRERhDMRgqDFVFTLAREYPRREQVMQYG---EDDLTFIRRLLAE 181 Yersinia pestis...
BAB75019     107 MLMLDCRGLATKLTVGRHNRYFVDTKDSDAIAEIIAQH--S----LSADVAATQVQHPEIVQYY---ATDWDFILSRAEM 177 Nostoc sp. PCC ...
WP_003147059  91 SYQVTLRPWLWLLTRTSDCRIFQNQKVPDIIKQVFRDL-GFS--DFEDALSRSYREWEYCVQYR---ETSFDFVSRLMEQ 164 Pseudomonas aer...
CAD17254     195 RGCISGYEHDATGHRLVIFDRSSQCPPVEGDQRIPFqAAGGPQEENA---IQRWTPVQTAAAALFAASAFDFKHPQARHQ 271 Ralstonia solan...
CAC89364     161 EGVWYYFEHNEDKHTLVMTDQQQFPVLEGHYAELSF-LPDSEEMRAIregIQRIQRSQRIHSSEIVLRDFDFLNPRNTLQ 239 Yersinia pestis...
CAC89614     194 EGIFYYFEFSTGKNTVVYADDVGSLPKG---ASLPYnPNVAAQAQELs--ITTFTRSAQVRPAMVQLKDYTFKNPK-WAA 267 Yersinia pestis...
CAC90297     182 VGIWFRFTADPKLNIDVVEFYDDQRFYQQGLTLQAVpPSGMHDSGMEs--VWDLSSAHQVVEKSVSTGDYNYRTATADLT 259 Yersinia pestis...
BAB75019     178 NGQIVVAQDE--KIKVKAPNTSGAPQITLTYGVNLLeLEAAMDARHQ----YQAVKATSWNYADQALVEAEASEPT--VN 249 Nostoc sp. PCC ...
WP_003147059 165 EGIYYWFRHEQSRHILVLSDAYGAHQSPPNYASVPY-YPPTLEQRERd-hFYDWHMAREVQSGSLSLNDYDFQRPGARLE 242 Pseudomonas aer...
CAD17254     272 AESTQRKQ--GSVPELEAHEYAGHYGFPKEdp------rGIGLLNLRREEIEAHAEQYQAEGNNASVASGLWFELSGHFS 343 Ralstonia solan...
CAC89364     240 THIEESRQh-LQGVPLEWYDYAAGYTDPQH---------GESIARLRLEAIQSNGQLLSGESNATGLVPGRSFALVQHPD 309 Yersinia pestis...
CAC89614     268 EFSEQARElqNQRPDYEHFDFPGRFKDEQH---------GKDFTRYRLEALRNDANKGQGESNEFTLQPGQLFSLSAHPR 338 Yersinia pestis...
CAC90297     260 AGADITRG--DTTTYGEAYHYADNYLTAGSegrepesesGAFYARLRHERYLNNQARFAGVANAAALAPGQELNVTGNDV 337 Yersinia pestis...
BAB75019     250 NQGNLSGRqlAQVIDLSALELRHSGLVAEP----------ELKAWADAQLLKSRLAKIQGRVKTKGYPDAKVDVLIQLAG 319 Nostoc sp. PCC ...
WP_003147059 243 VRSNIARS--HAAADYPLYDYPGEYVQSQD---------GEQYARTRIEALQARYERVRLRGRARGLGSGHLFKLSGYPR 311 Pseudomonas aer...
CAD17254     344 NTEraeDNQYLIVEASHSasnnyLAELGRQGGHEAplfagrkGEYRNRFIAIKRAVPWRPgrgRNSIDVKVERHQSATVV 423 Ralstonia solan...
CAC89364     310 NNR---NRGFKLISCDYS-----FVQDGPDSASQG-------RNVACKFKALNDDVVYRPq--CVTPPPKVPGVQSATVV 372 Yersinia pestis...
CAC89614     339 DDL---NHAWQIVSIQHTgk--qMQALEQESGDQG-------TVLFNQFSFIPPTQTWRP---TPLPKPVTDGPQIAMVV 403 Yersinia pestis...
CAC90297     338 PAQ---FGKGVIITRITS---------HARRDR-S-------YEVHFEAIPYSEDYCFRP---ALIRKPTMAGTLPARVT 394 Yersinia pestis...
BAB75019     320 VGDr--FNGLAYVSGIRHe----IVGGAWDTHIQMg--------LPPQWFYQEVDIIDKP---AAGLLPGVNGLQIGVVV 382 Nostoc sp. PCC ...
WP_003147059 312 EDQ---NREYLVVGAEYR-----VVQELYETGGGGv-----gAQFESELDCIDAGQAYRPl--PTTPLPIVRGPQTAVVV 376 Pseudomonas aer...
CAD17254     424 AAGGLg-ALDVDEHGRVLIRFHWDREGK----YSARVRVASNWAGGETGMVSWPRAGSEVLVIALDGNPDHFLIIGGVHN 498 Ralstonia solan...
CAC89364     373 GARES--EVHTDKFARIRVHFHWDRYKTteddSSCWIRVVQAWAGKGWGVLAMPRVGQEVLVNYVDGDLDRPMVTGIVYN 450 Yersinia pestis...
CAC89614     404 GPPSE--EIYCDEYGRIRLQFQWDRYGQsndqSSCWIRVTQPWAGQGWGMLAIPRIGQEVVVDFLHGDPDQPIVTGRTYH 481 Yersinia pestis...
CAC90297     395 STTANdtYGHIDKDGRYRVNLMFDRDSWesgyESLWVRQARPYAGDSYGLHLPLLAGTEVAIAFEDGNPDRPYIAYVLHD 474 Yersinia pestis...
BAB75019     383 QLQDD-----PNGEDRILVKVPIIDAQAe----gIWARIATLDAGNNRGSFFRPEVGDEVILGFLNDDPRDPVVLGMLNS 453 Nostoc sp. PCC ...
WP_003147059 377 GPKGE--EIWTDQYGRVKVHFHWDRHDQsnenSSCWIRVSQAWAGKNWGSMQIPRIGQEVIVSFLEGDPDRPIITGRVYN 454 Pseudomonas aer...
CAD17254     499 AHRMPPWQLPAQGALMGIRSRelTPDGGndpggSSNHLVLDDTAGRIQAQLKSDHL 554 Ralstonia solanacearum GMI1000
CAC89364     451 GENPPPYRLPDHINYSGFVSR--SLRFGqp--qHASQLTFDDNRGNERIMLHAERD 502 Yersinia pestis CO92
CAC89614     482 ANNLPPSALPGAKTQMALQSK--THKGE-----GYNELRFEDQDGKQELSMRAQRD 530 Yersinia pestis CO92
CAC90297     475 SAHG------DHVTISNYKRN--VLRTP-----SNNKLRLEDERGKEHIKLSTEYG 517 Yersinia pestis CO92
BAB75019     454 SAKPAPLRATAENHRKGFFTR------------SQMQLTFDDDKKIITLQTPGGNK 497 Nostoc sp. PCC 7120
WP_003147059 455 AEQTVPYELPANATQSGMKSR--SSKGGtp--aNFNEIRMEDKKGAEQLFIHAEKN 506 Pseudomonas aeruginosa
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