Conserved Protein Domain Family
YidE_YbjL_dupl

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TIGR01625: YidE_YbjL_dupl 
AspT/YidE/YbjL antiporter duplication domain
This model represents a domain that is duplicated the aspartate-alanine antiporter AspT, as well as HI0035 of Haemophilus influenzae, YidE and YbjL of E. coli, and a number of other known or putative transporters. Member proteins may have 0, 1, or 2 copies of TrkA potassium uptake domain pfam02080 between the duplications. The domain contains several apparent transmembrane regions and is proposed here to act in transport. [Transport and binding proteins, Unknown substrate]
Statistics
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PSSM-Id: 130686
View PSSM: TIGR01625
Aligned: 9 rows
Threshold Bit Score: 117.818
Threshold Setting Gi: 503582245
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
CAC26534      16 MTVGLLLGRIKIFG------FRLG-VAAVLFVGLALSTI--------EPDISVPSLIYVVGLSLFVYTIGLEAGPGFFTS 80  Corynebacterium...
CAC93534      15 AVLGLWIGNWKIYG------VGLG-IGGVLFGGIIVGHFaqt--yqiVLNGDMLHFIQEFGLILFVYTIGIQVGPGFFSS 85  Yersinia pestis...
CAC90156      21 LALGLCLGKLRLGS------IQLGnAIGVLVVSLLLGQQ----------HFAINTEALNLGFMLFIFCVGVEAGPNFFSI 84  Yersinia pestis...
CAC90156     390 FILGLMIGLITFQFsn--fsFGIGnAAGLLLAGIMLGFLranhptfgYIPQGALNMVKEFGLMVFMAGVGLSAGGGINSS 467 Yersinia pestis...
CAC26534     369 LMIGVLVGMVEFPLpgg-ssLKLGnAGGPLVVALLLGMInrtgkfvwQIPYGANLALRQLGITLFLAAIGTSAGAGFRSA 447 Corynebacterium...
WP_013816321 387 LVLGCVFGMIPFYLpgvsmpIKLGlAGGPIIIGILMGAFgprfhlttYVTNSANLLLRQFGIILYLGGLGLASGANFFDT 466 Porphyromonas g...
WP_013816321  28 CALGLQLGKLRIGt------ISLG-ITFVFFVGILASHFg------vTTDPVMLTFAQNFGLVIFVYALGLQVGPSFFPS 94  Porphyromonas g...
C86053       386 IGLGVLLGSIPVFVpgfpaaLKLGlAGGPLIMALILGRIgsigklywFMPPSANLALRELGIVLFLSVVGLKSGGDFVNT 465 Escherichia coli
WP_011013749 364 lslglllgaiPIPLpgg-ttMSLGfGGGPIIAGLILGALkhtgpltwQMPFHANRTISTLGLALFLAGVGTSAGAGFRAA 442 Corynebacterium...
CAC26534      81 MKTTG--LRNNALTLGAIIATTALAWALITVLNIDAASGAGMLTGALTNTPAMAAVVDALPSliddtgqlhliAELPVVA 158 Corynebacterium...
CAC93534      86 LRVSG--LRLNCFAILMVVVGGLVTAIIHKLFAVPLPIILGVFSGAVTNTPALGAAQQILTDlgsp----pqlVSQMGMG 159 Yersinia pestis...
CAC90156      85 FFRDG--KNYLMLALVMVGSAMILALGLGKLFGWDIGLTAGMLAGSMTSTPVLVGAGDTLRHtmangsslqqaQDNLSLG 162 Yersinia pestis...
CAC90156     468 LGAVGgqMLISG-LIVSLVPVVICFVFGAYVLRMNRALLFGAIMGARTCAPAMDIISDTAR------------SNIPALG 534 Yersinia pestis...
CAC26534     448 ISDPQslTIIGFGALLTLFISITVLFVGHKLMKIPFGETAGILAGTQTHPAVLSYVSDASR------------NELPAMG 515 Corynebacterium...
WP_013816321 467 IIHGDglLWVGAGFLITMLPTLLVGWASIKLLRNRYDGTAGMICGSTANPMALDYVNSQLK------------GDGASVV 534 Porphyromonas g...
WP_013816321  95 LKKGG--IAQNLISLGLVLLTFLLCILLYYILGISMPNLMGIVAGATTNTPALGAAQTTLHQinpd---ataeMAEMALA 169 Porphyromonas g...
C86053       466 LVNGExlSWIGYGALITAVPLITVGILARMLAKMNYLTMCGMLAGSMTDPPALAFANNLHPT-----------SGAAALS 534 Escherichia coli
WP_011013749 443 LTDSSslIYMAGGLVITLASALLCAVIGMWVLRLRWDEAMGVAAGTTTNPAIISYLNGQTGT------------DLANRG 510 Corynebacterium...
CAC26534     159 YSLAYPL 165 Corynebacterium glutamicum
CAC93534     160 YAMAYPF 166 Yersinia pestis CO92
CAC90156     163 YALTYLI 169 Yersinia pestis CO92
CAC90156     535 YAGTYAI 541 Yersinia pestis CO92
CAC26534     516 YTSVYPL 522 Corynebacterium glutamicum
WP_013816321 535 YATVYPL 541 Porphyromonas gingivalis
WP_013816321 170 CAVTYPL 176 Porphyromonas gingivalis
C86053       535 YATVYPL 541 Escherichia coli
WP_011013749 511 YATVYPT 517 Corynebacterium glutamicum
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