Conserved Protein Domain Family
phage_P_loop

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TIGR01618: phage_P_loop 
phage nucleotide-binding protein
This model represents an uncharacterized family of proteins from a number of phage of Gram-positive bacteria. This protein contains a P-loop motif, G/A-X-X-G-X-G-K-T near its amino end. The function of this protein is unknown. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 130679
View PSSM: TIGR01618
Aligned: 4 rows
Threshold Bit Score: 317.123
Threshold Setting Gi: 1926332
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAC79525       2 KIIRANDIQRTKnWRILIYGKAGLGKTSLIKNMPGKTLVLSLDNSSKVLAGTENVDI--IDFDREHPTEFITEFLTqADN 79  Streptococcus p...
CAA66764       2 KFYEDGNIPEIP-NMYFIYGDGGTGKTSVVKQFVGHKLLFSFDMSSNVLIGDKDVDVimFEHRDMPNIQAMVEQYV-MQG 79  Lactobacillus p...
WP_010991282   2 EFIQSEKMKRSEyFNIMIYAKPGAGKTTTIKYLEGKTLMLDCDGTSKVLSGLPNITI--ATLDPRNPVQDMADFYG-YAK 78  Listeria
WP_002995975   2 KITKATEIKNND-SCYLIYGNPGFGKTSTAKYLPGKTIVINIDKSAKVLRGNENIDI--ADIDTHKIWGEWLDTVKeLLN 78  Streptococcus p...
AAC79525      80 -LIKNYENLVIDNISSFQSDWFIEQGRKSKNgisnELQHYSQWTNYFLRVLTVIYS-KPINIYVTAWEDTHELNLETGQi 157 Streptococcus p...
CAA66764      80 iQDVKYRIIVLDNITALQNLVLENIDDAAKD----NRQNYQKLQLWFRDLGTILKE-SGKTVYATAHQLDNGSSGLSGE- 153 Lactobacillus p...
WP_010991282  79 aHAEEYDNVVIDNLSHYQKLWLMFNGRNTKSgq-pELQHYGIFDTHLIDLISVFNNlPNTNIVYTAWENTRQIQMESGQl 157 Listeria
WP_002995975  79 gAANDYDNIVIDNVSELFRACLANLGREGKNhrvpSQADYQRVDFTILDSLRALLQ-LNKRIVFLAWETSDQWTDENGMi 157 Streptococcus p...
AAC79525     158 lTQYVPQIRASVLNQLLGLTDVVGRIVVNAktGA---RGLILEGSEGTYAKNRLDNRTACKIEDLFKFG 223 Streptococcus phage O1205
CAA66764     154 -GRYQADMNEKTFNAFTSMFDLVGRIYLTG--GE---RMIDLDPEKGNHAKNRIDGRKLIKANELIQTS 216 Lactobacillus phage phig1e
WP_010991282 158 yNQFLPDIREKVVNHVMGIVPIVARLIRNPetGQ---RGFLLTENNGNFAKNQLDNREFALQEDLFQIG 223 Listeria
WP_002995975 158 yNRAMPDIRTKILNNFLGLTDVVARLVKKTtdDGeevRGFILQPSASVYAKNRLDDRKGCKVEELFETT 226 Streptococcus pyogenes
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