Conserved Protein Domain Family
holin_phiLC3

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TIGR01598: holin_phiLC3 
holin, phage phi LC3 family
Phage proteins for bacterial lysis typically include a membrane-disrupting protein, or holin, and one or more cell wall degrading enzymes that reach the cell wall because of holin action. Holins are found in a large number of mutually non-homologous families. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 130659
View PSSM: TIGR01598
Aligned: 4 rows
Threshold Bit Score: 94.8891
Threshold Setting Gi: 530797
Created: 8-Oct-2014
Updated: 2-Oct-2020
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAA20877       4 INWKLRLKS----KAFWLALLPALFLLI---QAIGASFGYKWNFVilNQQLAAVVNAAFALLAIVGVVADPTTSGLGDSD 76  Lactococcus pha...
WP_031897131   3 INWKLRFKN----KAVLTGLVGALLLFI---KQITDLFGLDLSTQ--LNQASAIIGAILTLLTGIGVITDPTSKGVSDSS 73  Staphylococcus ...
WP_010990907   6 INWIVRFKN----PVWLIALVGGLFLIA---QSVLYVFGIEW-DY--NELLNRLITVITSIFALIGIIQDPTTANLKDSE 75  Listeria innocua
WP_010991150   3 INWKVRLKNwrtvVATLITVLGVAWTAGgftISDLDNWSVLWLSF--VRFLNSPMAIITTIVAVVGILMDPTTSKFSDSL 80  Listeria
AAA20877      77 RVLNKDK 83  Lactococcus phage phiLC3
WP_031897131  74 IAQTYQA 80  Staphylococcus aureus
WP_010990907  76 RAQKYNE 82  Listeria innocua
WP_010991150  81 KVMNYSE 87  Listeria
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