Conserved Protein Domain Family
holin_lambda

?
TIGR01594: holin_lambda 
phage holin, lambda family
This model represents one of a large number of mutally dissimilar families of phage holins. Holins act against the host cell membrane to allow lytic enzymes of the phage to reach the bacterial cell wall. This family includes the product of the S gene of phage lambda. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
?
PSSM-Id: 273709
Aligned: 6 rows
Threshold Bit Score: 97.4852
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
?
Aligned Rows:
Sequence Alignment
?
Format: Row Display: Color Bits: Type Selection:
CAD05588           2 KMHNAPHSWPGLLELLQSWWRgdtPLGAVVMSIIMAGLRIAYFGGGggWKRKTLEILLCGALTLTFASALEYVGWPKSLS 81  Salmonella ...
WGS:AAAB:ebiP819   4 MPNKDPTLWAALLAWLMDNWP---AVYGALLALAIAFLRITYAGGR--GRRRLIESLLCGLITLAAATGTQLLGIPQEAT 78  Anopheles g...
P44188             1 MPIKEPDVWALIWSWLQTNLSs-sSAQSAFWALFISLLRFGFMRKKpaIRYVLIDAAMCASIAGVAVPICTHLFGHTEYS 79  Haemophilus...
P03705             2 KMPEKHDLL-----AAILAAKe--QGIGAILAFAMAYLRGRYNGGA--FTKTVIDATMCAIIAWFIRDLLDFAGLSSNLA 72  Enterobacte...
Q9T1T7             1 -MSEFCK-------PLLDILRh--QGTCAALAFIMALLRARYHRKD--FYRSLLDALMCAMLGGVAHELLQFLGLKADYS 68  Endosymbion...
WP_001576006       6 MNDKTPEFWAAVLTGLKNAWP---QILGALMAGLIAYGRLIYDGAT--RKNKWLEGVLCGALSLCVTSALDVVGLPVSIS 80  Salmonella ...
CAD05588          82 VAIGGGVGLIGVDAIRGAAMRVIGNK 107 Salmonella enterica subsp. enterica serovar Typhi str. CT18
WGS:AAAB:ebiP819  79 PLLGGMVGLLGIDIIRDRAALMFNKK 104 Anopheles gambiae str. PEST
P44188            80 SFLGTMIGFVGTEKIREFLFKFINRR 105 Haemophilus influenzae Rd KW20
P03705            73 YITSVFIGYIGTDSIGSLIKRFAAKK 98  Enterobacteria phage lambda
Q9T1T7            69 WLASVAIGYLGVDRIGNWLKKKTGKL 94  Endosymbiont phage APSE-1
WP_001576006      81 PFVGGIIGFVGVDKLREIAISALKKR 106 Salmonella enterica
| Disclaimer | Privacy statement | Accessibility |
NCBI Home NCBI Search NCBI SiteMap