Conserved Protein Domain Family
holin_SPP1

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TIGR01592: holin_SPP1 
holin, SPP1 family
This model represents one of more than 30 families of phage proteins, all lacking detectable homology with each other, known or believed to act as holins. Holins act in cell lysis by bacteriophage. Members of this family are found in phage PBSX and phage SPP1, among others. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 130653
View PSSM: TIGR01592
Aligned: 6 rows
Threshold Bit Score: 102.934
Threshold Setting Gi: 18920589
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q99165         4 IDKGTVVRTVLLFIALVNQTLIMFGKPVLPVAEDQIHTLADALysagsaaFTIAASL-------VAWYKNNYVTSKGKMQ 76  Bacillus lichen...
CAA66519       3 MDTGTKVRTILFLIAWVNQLLSFDNLEPIPVDETTAQQVYDAVsv----lFTIVVTV-------WTSFKNNYLTLKGRKQ 71  Bacillus phage ...
BAA97650       1 MDIGTIVRTILLIVAWINQFLAIKHISPIPVDEVFISTVVTGI-----------VSI-------WTWWKNNNFTHASKKG 62  Staphylococcus ...
AAL82329       1 MDAKVITRYIVLILALVNQFLANKGISPIPVDEESVSSIILTV-----------VAL-------YTTYKDNPTSQEGKWA 62  Staphylococcus ...
WP_004399099   5 IDKGTIVRTLLLAIALLNQIMVMLGKAAFIINEEDINHLYDCL-------YTIFTIVfttstttAAWFKNNYITAKGKKQ 77  Bacillus subtilis
WP_010897139   9 ISAGTVTRFILLVVALINSGFEMAGVSFIPIDEEGVSTFVSLA-------FLGGASL-------WAYWKDNDITRKARTK 74  Bacillus halodu...
Q99165        77 KEVLQKKGL 85  Bacillus licheniformis
CAA66519      72 REALKKNGL 80  Bacillus phage SPP1
BAA97650      63 QQKIYEVKA 71  Staphylococcus phage phiETA
AAL82329      63 NQKLKKYKA 71  Staphylococcus phage phi 12
WP_004399099  78 KQVLKKENL 86  Bacillus subtilis
WP_010897139  75 EHLR----- 78  Bacillus halodurans
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