Conserved Protein Domain Family
oligosac_amyl

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TIGR01577: oligosac_amyl 
oligosaccharide amylase
The name of this type of amylase is based on the characterization of an glucoamylase family enzyme from Thermoactinomyces vulgaris. The T. vulgaris enzyme was expressed in E. coli and, like other glucoamylases, it releases beta-D-glucose from starch. However, unlike previously characterized glucoamylases, this T. vulgaris amylase hydrolyzes maltooligosaccharides (maltotetraose, maltose) more efficiently than starch (1), indicating this enzyme belongs to a class of glucoamylase-type enzymes with oligosaccharide-metabolizing activity.
Statistics
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PSSM-Id: 273702
Aligned: 3 rows
Threshold Bit Score: 974.782
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM07398   1 MLVTMGRKGEILGLFYPRRDHAQHVEESLACIHTg---DRLLWTNDNDWHSIQNYIEDTNIVSTKLYHDSg-IRISILDL 76  Methanosarcina acet...
Q59005    13 LLAKIGDYGEIEYLFYPQVGYETHFFDSALAVYD----KKVKWHWDDDWDITQKYIEETNIFKTILEDDK--IILTIKDF 86  Methanocaldococcus ...
BAA97041  17 ILAVLDRYGELHRLWWPQKDYAQHVNRLSAGVLIpgksKGVWWFHQPAGKHEQTYVHDAPILRTTATCREwpLEVVCEDE 96  Thermoactinomyces v...
AAM07398  77 VHPEVPVLIRRFKVQ--SQQKMSGKFFYYSNFNVGETSKKNSAFCDAEArLLAQYWQNYYIGIYALPEFTEWQIGKAMDt 154 Methanosarcina acet...
Q59005    87 VPVSHNVLIRRVYIKnkLDKKLNFKLFFYENLRIGENPITNTVKFLEDG-CIVKYNGKYIFCIGSDKRIDSFQCGNRYS- 164 Methanocaldococcus ...
BAA97041  97 VVSGRNVLMRHYVITncGEEEIPLQFVSYTSFHMGEMKRYNTTLFVGKKeALVHYRREFAVAVGSVLPTTRFAAGSNKD- 175 Thermoactinomyces v...
AAM07398 155 iwWTNSKYDMEDGKLQRNKEDIGNINN-AAGWDLDLEADG-ANEFVIFMGAASSRSLLYKRMHELSKLP--LEHIFEKTR 230 Methanosarcina acet...
Q59005   165 --KTSAYIDIENGILKEHKESSGLLTDsAISWNIKIDEKR-SLAFNIYILPQRFDGDFSIITEQLKIIMnnSENIKNLSM 241 Methanocaldococcus ...
BAA97041 176 --------HIDQGLFNCN--DIAMHTDgGCLWELGLCPPGeSKCMTLFFAFGKTVEKALEELEEARTLG--FERLRSQTL 243 Thermoactinomyces v...
AAM07398 231 EHWVMWLSKKHVLKMPGLEGHNnlrqELFNAYNRSLLMLYLLNDREyGSFVAAPEFDSnfekCggYGFCWNRDTSELVLA 310 Methanosarcina acet...
Q59005   242 NYWKHIIGEINRFIHPELRQNN----KIYSITKRALMTLLMLCDKE-GGIIAAPSLHP----D--YRYVWGRDGSYISIA 310 Methanocaldococcus ...
BAA97041 244 ADWEAYFGQAKPVQTGCEEMDR--------LYRRSLAVFRLMTDGEyGSMIAGPEFDEdfvrCggYAYCWGRDAAYIATA 315 Thermoactinomyces v...
AAM07398 311 LKHSGYPDYCDRFFKWCIRTQLPNGSWFQRYWLNGDIApswgnFDySTQIDETGATLHAMDIYYRILEglkKVEFLEEVW 390 Methanosarcina acet...
Q59005   311 LDLFGIRNIPDRFFEFMSKIQNADGSWLQNYYVNGKPR-----LT-AIQTDQIGSILWAMDVHYRLTG---DRKFVERYW 381 Methanocaldococcus ...
BAA97041 316 IDRAGYHDRVRAFYRWAMQTQSRDGSWQQRHYLDGRLAp-----QwGLQIDETGSILWGMWQHYLLTN---DRAFLDEIW 387 Thermoactinomyces v...
AAM07398 391 VSVLRAAEYLMKRTKSg--lHESCMDLWETYYGVFTYTNASIYSGLMGASHLAEENGELGMARRWKKRAEFIKQATIDRF 468 Methanosarcina acet...
Q59005   382 NTIEKAANYLRLVALN----FTPCFDLWEERFGVFAYTMGATYAGLKCAYSMSKAVNKRDKVKDWGKTIEFLKHEVPKRF 457 Methanocaldococcus ...
BAA97041 388 ESVQKAAQFLILFIDPetglPLPSRDLWEEREGEHTYSASAVCGGLDAAAAVADKLGEKRLAQNWKEAAGAIRRAVEEKC 467 Thermoactinomyces v...
AAM07398 469 WLQEG-YFAKGIIneK------------------------------LDKTIDASILGAYMPFGMISPKDpverDMILFLI 517 Methanosarcina acet...
Q59005   458 YLEDEeRFAKSIN--P------------------------------LDKTIDTSILGLSYPFNLIDVDD----ERMIKTA 501 Methanocaldococcus ...
BAA97041 468 WDPERqVFYRGLKlmVppeewahaekegkrgmihvdekgisrpmlwQDPVIDISLVGISVPFNLIAPDD----ERMVKMA 543 Thermoactinomyces v...
AAM07398 518 ENIQKKLSIPINGgygIKRYENDSYIDGNPWVVTTLWLSEAMFAFILDLPNGKEgpyvEDLKKLTIEGVKCLRWAMAgST 597 Methanosarcina acet...
Q59005   502 EAIEKAFKYKVGG---IGRYPEDIYFGGNPWIITTLWLSLYYRRLYKVLKEKDD----NGADIYLQKSKKLFNWVMK-YS 573 Methanocaldococcus ...
BAA97041 544 EAIETHLTSPIVGg--IKRYENDPYVGGNPWILTTLWLAQLYIKQGRIKKALNH-----------------LKWVVDhRT 604 Thermoactinomyces v...
AAM07398 598 STGLLPEQVDKSSGKPAWAIPLGWSGSLMLDNILLLDKI 636 Methanosarcina acetivorans C2A
Q59005   574 FDGLFPEQIHKELGVPMSAMPLGWSNAMFLIYVYENDKV 612 Methanocaldococcus jannaschii DSM 2661
BAA97041 605 DLDLLPEQVDRETGKAAWVVPLTWSHAMFVLTVLDLLEI 643 Thermoactinomyces vulgaris
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