Conserved Protein Domain Family
A_thl_para_3677

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TIGR01572: A_thl_para_3677 
Arabidopsis paralogous family TIGR01572
This model describes a paralogous family of hypothetical proteins in Arabidopsis thaliana. No homologs are detected from other species. Length heterogeneity within the family is attributable partly to a 21-residue repeat present in from zero to three tandem copies. The central region of the repeat resembles the pattern [VIF][FY][QK]GX[LM]P[DEK]XXXDDAL.
Statistics
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PSSM-Id: 273698
Aligned: 4 rows
Threshold Bit Score: 392.667
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAF16769   20 EYWR---GVAESDGFDS-EDIrspvvlTGLFHYDCQSG-RRYPDPLLVKRYALLGLHRFNILQGTSFELDALQKFN-KTM 93  thale cress
AAF02890   28 VDES---DGFDVEGIQApPGG------TPLIHYDCHLPnSRHPDPVLVKLYASAGLHRYNMLEGTNFKLVDVMKFN-KLM 97  thale cress
NP_567829  90 EFYR---QIRESDGFDVdIRIpt----ssLYVYKCANN--DDLRGDIVGICARVGLHWYNFQKGSNLELMHVDKYN-SRF 159 thale cress
NP_564157   6 EYTLappQRNESDGFDYpDGIpisynlHRLRHFECEGSyPKYPYGSLVKFYAMVGLHRYNVLEGKNLQLDTLKSFNmRIN 85  thale cress
AAF16769   94 NLTSSYYITLLANEP--GAiPLQKTFQVRVDERKYDTLDLTVAIARLKKdqneaaETTKEPFVPHFCcsavsdgVFQGPL 171 thale cress
AAF02890   98 MHLSPFYITLLAQDP--VS-RSQQTFQVQVDEHCLSTMDLTVLIARPKA------VSTNESVLAPQS-------FSVEES 161 thale cress
NP_567829 160 CALMTYNITAEAVDPanDSrFTFQTCVTRATCQKDEDLRILTEVCRIKPk-----IQGTGDEIKRWNdea-iddIYKGNL 233 thale cress
NP_564157  86 CGASSYYITLAARVP--DS-GLKQIFQVLVHEERLGSLDMTCTIARPR-------VTTNVPFLRPHSese-ydyMDNDEL 154 thale cress
AAF16769  172 PDWPSDdaLRh--DRNRFYELEKSEWQATDWISLYLELLILATDRGMfgVAQTGLPQVQILKVVIETEEENEKpLDKRLN 249 thale cress
AAF02890  162 PEWPSD--FN---DGKRFYRVKESELRNNDWISLYLQLVLVSHDRMR--ISDSDLSKLKIVEAVIETKDDMLPpNERLLN 234 thale cress
NP_567829 234 PEWISDdtLMscsEQDHFYRVQESDIREHNWLQLYTEIASYSLWEGD--MRLKSCVPLQIKNVLVRTREDFKS--KEKLK 309 thale cress
NP_564157 155 PDWPSEiaFD---DTKRFHLVKESELRDNDWIRLYLELTLVAHDRF---LTVHYLSQLEIVKVAIEEVE--QP-N-ASLN 224 thale cress
AAF16769  250 ARRAHVYITFTGLPKSprlvEIG-EHVERKAIIRRVIDD-SGYLTLLGKF 297 thale cress
AAF02890  235 AKTAIVYITFKGFTKC----RIGdEHTERKTIVRRIFDEdTGHLSIKGEL 280 thale cress
NP_567829 310 AGNAIFYISFRGVNTP-----HG-PPQDHRAIVRRTVDGiPGHVCLEFKC 353 thale cress
NP_564157 225 TKTTFVYITYKDLAKA----QIG-EPVDRKAIVRKIINEtTGLLRLRGDY 269 thale cress
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