Conserved Protein Domain Family
S_layer_rel_Mac

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TIGR01567: S_layer_rel_Mac 
S-layer family duplication domain
This model represents a sequence region found tandemly duplicated in two proven archaeal S-layer glycoproteins, MA0829 from Methanosarcina acetivorans C2A and MM1976 from Methanosarcina mazei Go1, as well as in several paralogs of those L-layer proteins from both species. Members of the family show regions of local similarity to another known family of archaeal S-layer proteins described by model TIGR01564. Some members of this family, including the proven S-layer proteins, have the archaeosortase A target motif, PGF-CTERM (TIGR04126), at the protein C-terminus. [Cell envelope, Surface structures]
Statistics
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PSSM-Id: 273694
Aligned: 6 rows
Threshold Bit Score: 287.853
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAM03522      601 PTWTPYNFEGFYYNIDEGIGTEEMAI---EElnDREIPDGKLVYTSTPQEVEFEHDE----------WGN----FTVVGF 663  Methanosarcin...
AAM06918       46 YTWTPQTYSGFYYDLDTGEGSEYMTIh--LTagSRSIARNGLEYETKPIETEFEFEN----------WGS----YQVIGF 109  Methanosarcin...
AAM04323      374 LKYSENLY---YQNIEGSEHPAINNTs--PG--SNVIDEGELVYSTTSYDKTYRVKLdhyf--evqmVDN----YPVVYW 440  Methanosarcin...
WP_011023547   69 LVASEDWWGERLQYTETDGQYELGKNn--PR--NHVIGEDELVYSTRQFPNKYKVVSelgldanttpSELggmvYYKLPW 144  Methanosarcin...
WP_011020873   53 LTMDATDFAAFYYDIDDNVTTETLSIedvPDteGNVIGEGGLIYETTIQEVEYEYYNpd------agWDN----YSLMGF 122  Methanosarcin...
WP_011020920  300 CSWTADSFGMLFYDPEYDLSTESLSLs--LDagSDWIPEGGLVYESLPVKLAYKNPEmady---gedWFNe--gYSVLGW 372  Methanosarcin...
AAM03522      664 MAEKYFAGYPDDTvdgqiddvsllsdnVLSKVLTDS--DDKESMNSGSALVLEEGYSLNILEVDVNGEIVWVQLEKDGDV 741  Methanosarcin...
AAM06918      110 MAERYFAGYTENSsfvndgi-svisdgQLSKILIDS--DDRESMYTGSSLILEEGYSLNIVEVDVSGDKVWVQLEKDGDV 186  Methanosarcin...
AAM04323      441 LGNLYVAIGGDAR--------------KITPVVFEQyyEQEKVLKVGESWDLGKNYSLICNQFDEDGGKIWLSLYKGEVE 506  Methanosarcin...
WP_011023547  145 FGKPYVAVENDAT--------------QLANLVIDQpgSDKKILKAGDVWDLGKNYSLTVNQVDVEGNKVWFSLSKEGEE 210  Methanosarcin...
WP_011020873  123 FAEKYIPINPDKAd-------------KLSKLILDS--DDKYTIRTGEMLDLGEGYAIEAKQVDVDGEKVWLEFTKDGEF 187  Methanosarcin...
WP_011020920  373 NGEEYAYLGSDR---------------GIVNILLDE---DEKLLHPNEEYDLKEGYTLKVTDLDSDN--ACLTVSRNNLP 432  Methanosarcin...
AAM03522      742 VDDNFIAS------GDDYIYETELGDAED---VPI---IIVHFGTVFAGEETSAVFTQGIFQIS-DEYIEINNGDSFDEM 808  Methanosarcin...
AAM06918      187 VDNGFLSS------DSDYVYETDLGDTED---VPL---IAVHLDQIFSGTETNAVFVDGVFQVS-DEFVKIENGDRFEKM 253  Methanosarcin...
AAM04323      507 LGSEVLNVstndvdDRIFVETADFADKKD---VIY---FVTYVDKAFKSESDTFVKLMATLLLDkDTVLTIETEDKFGEM 580  Methanosarcin...
WP_011023547  211 LESGIVDAdgt-ieNQLFTAKADFGDGND---QLY---FITYVDSVFMSATDSFAVFKYTWLIDkNDILIIKEGDEYQGF 283  Methanosarcin...
WP_011020873  188 VDDEIISVst--adDEANTWDVELDDIED---EDDvivLKVHVNQVFQGAVDSIAQIEGLWLIDyANAMTIESDDEFGNL 262  Methanosarcin...
WP_011020920  433 VYSSIISPgk---sADFGTHTLLYTEELNgveVPI---FSVYVDSVIEGEELSAVSLKYLLHFS-DSPLEMSYGEEVGEL 505  Methanosarcin...
AAM03522      809 EISSVSESGITMKNDDDIGLDDDETI--DIMGDVKFKTADDS-------TLRFYPF 855  Methanosarcina acetivorans C2A
AAM06918      254 EISSTSSSGITMKNRDSFTLSKGDTV--EIMGILSFLVADAD-------DIRFAPI 300  Methanosarcina acetivorans C2A
AAM04323      581 KCIEASENSIKLANEDSITLELDGDTy--FTDDMYFTTSKAHed----ggFSIYPA 630  Methanosarcina acetivorans C2A
WP_011023547  284 EVKEASESELVLKNSDSITLNLDKDVknYFTDSWYFQTSDEGkgstspnGYVIYPA 339  Methanosarcina acetivorans
WP_011020873  263 DDVSIDGDTLTITNEDTFTLTRDDEE--EIGEGLYFATADTPs-----nVLRFYAM 311  Methanosarcina acetivorans
WP_011020920  506 TVVETYP---KLRLENKHEVWSGSDI--NVFEDLWIGRFEKKisg--nlYVTFYPY 554  Methanosarcina acetivorans
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