Conserved Protein Domain Family
major_capsid_P2

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TIGR01551: major_capsid_P2 
phage major capsid protein, P2 family
This model family represents the major capsid protein component of the heads (capsids) of bacteriophage P2 and related phage. This model represents one of several analogous families lacking detectable sequence similarity. The gene encoding this component is typically located in an operon encoding the small and large terminase subunits, the portal protein and the prohead or maturation protease. [Mobile and extrachromosomal element functions, Prophage functions]
Statistics
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PSSM-Id: 233464
Aligned: 3 rows
Threshold Bit Score: 482.139
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
AAL47517      10 REYMDNFAQQLAKSYGVSN--VAEl--FNVSPQLETKLRAAITESAEFLKMITVTTVDQIEGQVVDVGVSGLYTGRKAGG 85  Vibrio phage K139
AAK37800       3 KQAYYALAAALAKHFNQPLdsVLRgesFALKAPEAALLGENIQQRSDFLKGINMVQVAHTKGTKLFGATEKGVTGRKQTG 82  Haemophilus pha...
WP_011051736   6 RLQFTQFAEQIAKLNGVASp-FHS---FAVDPTVQQKLESRMQESSEFLSKVNIIPVDELSGQKVGIGVTGSIASRTDTG 81  Xanthomonas
AAL47517      86 -----RFTKQVGVGGHKYKLAETDSCAAITWAMLCQWANqggRDQFMKHLTEFSNQMFALDIMRIGWNGVSAEADTDPSA 160 Vibrio phage K139
AAK37800      83 -----RNLATLDHSQNGYELSETDSGILVNWSLFDSFAIf--KDRLVELYSEYFQNQVALDILQIGWNGQSVATNTTKTD 155 Haemophilus pha...
WP_011051736  82 agktrTPRNVAALDKNEYLAKKTDFDTAIPYALLDSWAK---FPDFQARLRDAIVKRQALDRLQIGFNGTHAAADTDRAA 158 Xanthomonas
AAL47517     161 nplGQDVNEGWIAFVKNRKASQVVD-----VDVYFDE-TNGDYRTLDAMASDIINNqIHPMFRNDPRLTVFVGSGLIGAA 234 Vibrio phage K139
AAK37800     156 ---LSDVNKGWLKLLQEQRAANFMTestksSGKITIFgDNADYANLDDLAFDLKQG-LDFRHQNRNDLVFLVGADLVSKE 231 Haemophilus pha...
WP_011051736 159 fplLEDVNIGWLQQYRTNAAQRVLAsg-ktAGKVVIGgAGADYGNLDALVYDVVSNlLDPWHRKDPSLVVVLGRDLMHDK 237 Xanthomonas
AAL47517     235 QAKLYDKA-DKPSEQIAAQKLD--KTIAGRPAYVPPFLPDNAMVVTIPENLQVLTQHGTAQRKAKHESDRKRSKTHTGAW 311 Vibrio phage K139
AAK37800     232 TKLIQQKHgLTPTEKAALGSHNlmGSFGGMNAITPPNFPARAAAVTTLKNLSVYTEAESVRRSLRNDEDKKGLVTSYYRQ 311 Haemophilus pha...
WP_011051736 238 YFPMVNKD-QPASEKIATDLILsqRRVGGLQVAEVPYLPDGALMVTSLANLSIYYQTGGRRRYIQEVPARDRIENYESSN 316 Xanthomonas
AAL47517     312 KVTQWVCWKRSPLTTQKKS 330 Vibrio phage K139
AAK37800     312 EGYVVEDLGLMTAIDHTKV 330 Haemophilus phage HP2
WP_011051736 317 DAYVVEDYGLGCVVEHIEI 335 Xanthomonas
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