Conserved Protein Domain Family
ubiA_other

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TIGR01475: ubiA_other 
putative 4-hydroxybenzoate polyprenyltransferase
A fairly deep split separates this polyprenyltransferase subfamily from the set of mitochondrial and proteobacterial 4-hydroxybenzoate polyprenyltransferases, described in TIGR01474. Protoheme IX farnesyltransferase (heme O synthase) (TIGR01473) is more distantly related. Because no species appears to have both this protein and a member of TIGR01474, it is likely that this model represents 4-hydroxybenzoate polyprenyltransferase, a critical enzyme of ubiquinone biosynthesis, in the Archaea, Gram-positive bacteria, Aquifex aeolicus, the Chlamydias, etc. [Biosynthesis of cofactors, prosthetic groups, and carriers, Menaquinone and ubiquinone]
Statistics
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PSSM-Id: 273646
Aligned: 7 rows
Threshold Bit Score: 297.723
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
WP_010230598   3 KIILIQQLIKCKYALFALLFLASSTLFCFS-----LpntslplfsLATMKILFLGGSAFFVARAFGMIVNQIVDCAIDKR 77  Chlamydia murid...
WP_010879962   4 KVRAYAELVKFEHTIFALPFALASVLLLAE-----E---------FPSLWKIFWILVALVSARTVGMAFNRLIDEPYDRL 69  Aquifex aeolicus
WP_010901605   2 NFRDIVDYIKLEHTVFDLPFIFTGYVLAAG-----R---------YIYPIKILLILIAAVSARASAMSINRIEGLRYDVI 67  Thermoplasma ac...
WP_010879665   3 RIKMYLDFIKIEHTLFALPFAYAGAFLAEG-----G---------LISLRLAFLILTAFTGLRTAAMTFNRIIDREIDAK 68  Archaeoglobus f...
WP_009988950  15 KLYIILRFLRIEQTFFSLPMAYLGAFVAIK-----G---------IPPIPTLILIFLALFFLRTAGMTNDNLADIEIDAK 80  Sulfolobus solf...
WP_027479699  10 QVKTYLELVKFEHTVFALPFAYAGMLLASMaqngtG---------WPGWHTLIWVTVAMAAARTAAMAANRVIDRAIDAR 80  Deinococcus rad...
WP_002851905   7 KFKDILELVVFKHSIFALPFLFSSMIVASK-----Land----taWFGFKALILGIICAVSARNFAMATNRLMDEDIDKD 77  Campylobacter j...
WP_010230598  78 NPRTKMRVLPAGLLSTKNSVLLLILCLVLFLSFCWFFNPLCFALAVLATLVMIIYPYTKRFTFLCHWILGSVYYLAILMN 157 Chlamydia murid...
WP_010879962  70 NPRTKNWPLVKGEVSKEEVRKIILVGSILFVFASLMLNFLAFLLSPVVLFLLWFYPQAKRITYYPHLVLGLVYFLIPVAV 149 Aquifex aeolicus
WP_010901605  68 NPRKKDWALVSGRISKREAIAMTIFFIALFEMATYFLNRLVFILSPVVIFLFLTDPLLKRITPWRHVYMGSTIGVGVLAG 147 Thermoplasma ac...
WP_010879665  69 NPRTAMRHLPAGLISLKEAYTIAFLALAIYFISAALINKTALMLSPIPAITAYIYPYLKRFTCLCHYVLGLNLAFAPLGG 148 Archaeoglobus f...
WP_009988950  81 NPRTKNRPLVTGAIKIREARTMIVASLILFFITSYFVNIWAFILAPIVALIIMSYPYMKRYTAFANYHLASIQGLAVFSG 160 Sulfolobus solf...
WP_027479699  81 NPRTAGREVPSGKVSPAQAWGLVAVSVAVLLFAAWQLNPLCVALLPLALLFLIGYPYTKRFTWLCHAWLGVTDGAAAAGG 160 Deinococcus rad...
WP_002851905  78 NPRCANRPNVSGKIGRKSVWIFIIINALIFISCSYFINTLAFYLSFPVLLVLAIYSAFKRFSSLAHLVLGFCLGLAPIAG 157 Campylobacter j...
WP_010230598 158 CFTIIPTPSfs----lfCMASLLGVSFGMIIAANDIIYAIQDLEFDQKEELFSIPARFGIKQSIKIASISLTISAIAYLL 233 Chlamydia murid...
WP_010879962 150 DVALNERIS--------LTAVILGIAMAFWVAGFDVLYALQDYEFDKEVGLKSIPVKYGVEKAIKIARLFHSITFVSLLI 221 Aquifex aeolicus
WP_010901605 148 YLAVIPAFPr------eLTIYLIFIGSSFWIAGFDVIYVIPDIEYDRINGLKTLMVRYGLKRGLQISIIFHAVTLISFWA 221 Thermoplasma ac...
WP_010879665 149 WIAVTDSIDifg---seLVPTLIGVAVMFWVAGFDMIYGLQDVDFDRSNNLHSIGAHFGVRAALWLSRLNHVIFFALIAI 225 Archaeoglobus f...
WP_009988950 161 AVAVLGLYYnsldqillRVPWFFVIGTILWAVGFDLYNHIPDAEFDKKMGLHSFAVVLG-RWALTFAGLNQLFSVVLDLL 239 Sulfolobus solf...
WP_027479699 161 WIAVTGHFS--------PVAWALWATVVFWMIGLDTIYATMDYAFDRANGVKSIPARFGIPAALNIAAVSHVLTFGLLLL 232 Deinococcus rad...
WP_002851905 158 SVIIMGEIH--------IYSVILCLGVTFWTAGFDLLYSLQDMEYDKKIGLHSIPAKFGSKATLFISSFCHILAVLFWLL 229 Campylobacter j...
WP_010230598 234 LGYFVPNktvFYLCSLLPLAGILCTIKHYSLINL-GSQSALQQKFFLGNLFLGITFLANMIGLFLL 298 Chlamydia muridarum
WP_010879962 222 LGFTHKEl--GFIYFLGLFLIAGFLVYEHSLIKP-WDLSKINKAFFTVNGWISVIFFIVVLIDYYL 284 Aquifex aeolicus
WP_010901605 222 VMLYVRT----YWYLAAMIVISFLVVYQHVILDP-SKPETVRRSFFNANSFIGFLYLISLILGIVF 282 Thermoplasma acidophilum
WP_010879665 226 ALQIH-N---AKLAELFLPLIALLLFYEHYIVRDgYDEAKIQIAFFYVNALVSSALLAAIFADAIF 287 Archaeoglobus fulgidus
WP_009988950 240 GDFYYGL---GPIAIFATVLHGLIMAYAYYLA----SQKNDFGRAFYYNIYSSIVLGLGVDIDVIL 298 Sulfolobus solfataricus
WP_027479699 233 VGVLAGA---SVWYYLAALVMGAILLFEHRIVDP-QDLGRVNVAFFDANMWLAITMLLGVVMDVTW 294 Deinococcus radiodurans
WP_002851905 230 FVWEVWGvalGKIALIGVIISGIILALEHKIVH--KNFAHIDRAFFTLNGYLSIIFFIFIWIDLLW 293 Campylobacter jejuni
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