3NDC,1CBF


Conserved Protein Domain Family
cobM_cbiF

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TIGR01465: cobM_cbiF 
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precorrin-4 C11-methyltransferase
This model represents precorrin-4 C11-methyltransferase, one of two methyltransferases commonly referred to as precorrin-3 methylase (the other is precorrin-3B C17-methyltransferase, EC 2.1.1.131). This enzyme participates in the pathway toward the biosynthesis of cobalamin and related products. [Biosynthesis of cofactors, prosthetic groups, and carriers, Heme, porphyrin, and cobalamin]
Statistics
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PSSM-Id: 200107
Aligned: 12 rows
Threshold Bit Score: 367.035
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Program:
Drawing:
Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
3NDC_A         6 VHFIGAGPGAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDVARLHSG 85  Rhodobacter cap...
CAD17771       3 VYFIGAGPGAADLITLRGARILGSVPMVLYAGSLVPPEMLQHCRPDAELHDTATLSLDEQEACYRRAQAEGKDVARLHSG 82  Ralstonia solan...
CAA04314       3 LYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREGKMVVRVHTG 82  Bacillus megate...
AAK67500      24 VVFVGAGPGAADLISVRGAHVIAQADIIIWASSLVLPTWWPTTSRAPKLVDSAALSLEDFEPLLTRAHDEDLLVARVHTG 103 Propionibacteri...
WP_010871103   7 VIIVGAGPGDPELITIKGKKAIEEADVIIYAGSLVNEKLLEYNKKNAEIYNSANMNLEEIIDVMVKAVNQGKKVVRLHTG 86  Methanocaldococ...
WP_010901081   1 mYIIGAGPGDPDLLTVKARRLIESCDVIIYAGSLVNPEILKLARPGSEIHNSAELNINQIMDIIKDAYERGLDVARIHSG 80  Thermoplasma ac...
WP_021677999 369 IEIVGAGPGDPDLVSVRGRQFLEKADLILYAGSLVPRELTACAKAGATVRSSAAMNLQEQFEIMSDFYRRGKLVVRLHTG 448 Porphyromonas g...
WP_009991811   5 VVFIGSGPGDPELITIKAKKYIETADVIVYAGSLVNPEILKWSRKDAEVYNSSSLTLNEIVEIMVKKASEGKLVARLKSG 84  Sulfolobus solf...
WP_010871331  12 VYFVGAGPGDPDLLTIKGQKLLQAADLVLYADSLVPKQILADVRPQAECVATGNKTLETIVPLMITAVRQGKIVVRLHSG 91  Synechocystis s...
O68100         3 VHFIGAGPGAADLITIRGRDLIASCPVCLYAGSLVPEALLAHCPPGAKIVNTAPMSLDAIIDTIAEAHAAGQDVARLHSG 82  Rhodobacter cap...
1CBF_A        23 LYIIGAGPGDPDLITVKGLKLLQQADVVLYADSLVSQDLIAKSKPGAEVLKTAGMHLEEMVGTMLDRMREGKMVVRVHTG 102 Bacillus megate...
WP_011714689   9 VWFVGAGPGDPDLITVKGRRLLERADAVLYAGSLVAEGALAWCRTECVVADSKGMALQEITDWLSAHAGVGKVVVRLQTG 88  Magnetococcus m...
3NDC_A        86 DLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSG-RaSAMP-AGETLENFARTGAV 163 Rhodobacter cap...
CAD17771      83 DPAIYGATAEQMRRLEALGIDYEIVPGVSSFTAAAAVLGAELTRPAVSQSIVLTRVSGrA-SAVP-ELESVARFAEHQAT 160 Ralstonia solan...
CAA04314      83 DPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEG-R-TPVP-EFEKLTDLAKHKCT 159 Bacillus megate...
AAK67500     104 DPSIYGATAEQRDLCRSLDLAFETVPGISAFSAAAARMNVELTVPEVSQSITITRLEGgR-TPMP-EGETIASFAAHGAT 181 Propionibacteri...
WP_010871103  87 DPSIYGAIKEQIDELSKYGIDVEIIPGVSSLFAATASLKVELTLPEVSQTVIITRPEG-R-TPMP-EKEKLRDLAKHQST 163 Methanocaldococ...
WP_010901081  81 DPHIYGALKDQTSYLEALGIPYEVVPGVSVLTSAAASLGIELTMDGISQAVIIARGSL-R-IPVP-DREQIRKLAEHGST 157 Thermoplasma ac...
WP_021677999 449 DPCIYGAIQEQMALFDHYGMRYHITPGISSFQAAAAALRSQFTIPERTQTIILTRGEG-R-TPMP-EKEKLHLLAQSQST 525 Porphyromonas g...
WP_009991811  85 DSSIYGALFEEMWALEAAGIPFEVIPGITAAIAAASVIPIELTVPKLSQTVIITRASL-R-VPMQgSIKDFAKMVKIGAT 162 Sulfolobus solf...
WP_010871331  92 DLTLYSAIHEQMQALGEADIPFVCVPGISAFQAAAAILNCELTVPDLVQTIVLTRISGaA-SAVP-EREELAGLAYHQAS 169 Synechocystis s...
O68100        83 DLSIWSAMGEQLRRLRALNIPYDVTPGVPSFAAAAATLGAELTLPGVAQSVILTRTSGrA-SAMP-AGETLENFARTGAV 160 Rhodobacter cap...
1CBF_A       103 DPAMYGAIMEQMVLLKREGVDIEIVPGVTSVFAAAAAAEAELTIPDLTQTVILTRAEG-R-TPVP-EFEKLTDLAKHKCT 179 Bacillus megate...
WP_011714689  89 DPSLYGSLVEMVQPLDAVGIASRVVPGVSSAFASAAAAVESLTLPEVTQTVMFTRMEG-R-TPMP-AGEQLADLARHGTT 165 Magnetococcus m...
3NDC_A       164 LAIHLSVHVLDEVVQKLVPH-YGEDCPVAIVWRASWP-DQRVVRATL-ATLQTSLGAE-LERTALILVGRSLAT-Ed--- 235 Rhodobacter cap...
CAD17771     161 MCIFLSGQRLKQTVADLLLH-YPADTPVALVRRATWP-DQAIHRCTL-GTLLLEVSQKdWLLTTLLLVGRALSReG---- 233 Ralstonia solan...
CAA04314     160 IALFLSATLTKKVMKEFINAgWSEDTPVVVVYKATWP-DEKIVRTTV-KDLDDAMRTNgIRKQAMILAGWALDP-Hi--- 233 Bacillus megate...
AAK67500     182 MAVYLSAARNRALQEALIEGgYAPATPCIIGFEVTWP-GEMMMRCRL-DELSDTMREHkLWKHTIVLVGPALAEgPi--- 256 Propionibacteri...
WP_010871103 164 MAIFLGVSMIDKVVKELIEGgYREETPVAVVYHASWD-DEKIVRGTL-KDIAEKVKKEgIKKTALIIVGEVLNP-Ky--- 237 Methanocaldococ...
WP_010901081 158 MVIFTGIHIIDSIVKDLIDGgYSPDTPVGVVYRSTWP-DEIVIKGRL-SNIATLVHERrIYRTALIIVGDVVDP-Kf--- 231 Thermoplasma ac...
WP_021677999 526 MCIFLSAGIVDDVQRELMMH-YSPDTPVAACYRLTWP-DEKIFRGTL-RHLAEIVKGNnLTLTTMIVVGEAIDN-Re--- 598 Porphyromonas g...
WP_009991811 163 MVIYTGIHIIDRVVNDLKEGgLTDDTPVIVVYRATWP-EQKIIKGTL-ADIVSKVREAkIYRDSVIIVGLSADP-Qq--- 236 Sulfolobus solf...
WP_010871331 170 LGLYLAARHVEKAQNQLLEH-YPGDTPVAVCFRVGWP-DEKIWLVPL-AEMAALSLREnLIRTTLYLISPALKT-Dl--- 242 Synechocystis s...
O68100       161 LAIHLSVHVLDEVVQKLVPH-YGEDCPVAIVWRASWP-DQRVVRATL-ATLQTSLGAE-LERTALILVGRSLATeD---- 232 Rhodobacter cap...
1CBF_A       180 IALFLSSTLTKKVMKEFINAgWSEDTPVVVVYKATWP-DEKIVRTTV-KDLDDAMRTNgIRKQAMILAGWALDPatpwls 257 Bacillus megate...
WP_011714689 166 LCIFLSVTLLAQVQQALLAAgWHEEAPLLVVYKASWPgEEQIVRGRLgEDLVARCRAAgIKSQTMIIASPALGA-Rgrvg 244 Magnetococcus m...
3NDC_A       236 FD---E---SRLYAGDYDRRYR 251 Rhodobacter capsulatus SB 1003
CAD17771     234 GV---E---SSLYAAGFTHIFR 249 Ralstonia solanacearum GMI1000
CAA04314     234 HD---KdyrSKLYDKTFTHGFR 252 Bacillus megaterium
AAK67500     257 AT---R---SHLYHPGFRHEYR 272 Propionibacterium freudenreichii subsp. shermanii
WP_010871103 238 YA---Y---SKLYDKNFEHEYR 253 Methanocaldococcus jannaschii
WP_010901081 232 VK---H---SKLYDPEYVHSFR 247 Thermoplasma acidophilum
WP_021677999 599 GL-------SRLYADEFKHLFR 613 Porphyromonas gingivalis
WP_009991811 237 IKnmvR---SSVYDPKHNHSYR 255 Sulfolobus solfataricus
WP_010871331 243 PR---R---SRLYHPDHSHLFR 258 Synechocystis sp. PCC 6803
O68100       233 FD---E---SRLYAGDYDRRYR 248 Rhodobacter capsulatus SB 1003
1CBF_A       258 glgenpairamfvahlhqalnm 279 Bacillus megaterium
WP_011714689 245 LK---K---SKLYDAHFSHGFR 260 Magnetococcus marinus
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