Conserved Protein Domain Family
TIGR01370

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TIGR01370: TIGR01370 
extracellular protein
Original assignment of this protein family as cysteinyl-tRNA synthetase is controversial, supported by but challenged by and by subsequent discovery of the actual mechanism for synthesizing Cys-tRNA in species where a direct Cys--tRNA ligase was not found. Lingering legacy annotations of members of this family probably should be removed. Evidence against the role includes a signal peptide. This family as been renamed "extracellular protein" to facilitate correction. Members of this family occur in Deinococcus radiodurans (bacterial) and Methanococcus jannaschii (archaeal). A number of homologous but more distantly related proteins are annotated as alpha-1,4 polygalactosaminidases. The function remains unknown. [Unknown function, General]
Statistics
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PSSM-Id: 273582
Aligned: 3 rows
Threshold Bit Score: 458.669
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
PubMed ReferencesClick to see Conserved Features Help

Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
Q58872  21 ICIILIVGFFISFDSTFLDNPKMmsksknnirnaenltnisknsNNLKFLWAYQLQN---ADIDEIANSNFTLIVIDYSK 97  Methanocaldococcus ja...
Q9X1D0   8 LFIIIVSLFFISSCSTVMSTEGW---------------------FMPFDNWLYQLQN---ADPVEISSSGFEIAVIDYSK 63  Thermotoga maritima MSB8
Q9RWG3   6 CSLLLLSACAGPSEPQASGAGPAqtpppvtvp---mtppskkpaLSAVQHWGVQLTGygqTRLNAVHTSPFELVVVDPFD 82  Deinococcus radiodura...
Q58872  98 DGTENGKYSEEEIEKLKKAGKIPIAYISIGEAEDYRFYWDNEWLKNPPKWLGDENPEWEGCYAVKYWHPEWKKIIFSYLD 177 Methanocaldococcus ja...
Q9X1D0  64 DGSESGEYSPEEIKIMVDAGVVPVAYVNIGQAEDYRFYWKESWYTNTPEWLGEEDPAWPGNYFVKYWYNEWKEIVFSYLD 143 Thermotoga maritima MSB8
Q9RWG3  83 D---DGTPWPAAEVRAAAQGRWLIAYLSMGAAESYRSYWQKGWKVGAPAWLLNEDPDWPGNFDVAYWDPAWQAIALAQLD 159 Deinococcus radiodura...
Q58872 178 KIIQQGFCGVYLDKVDEFEYWAENG-YDEDFTAKEMIKFIVEISNYCRNKTNNsFIIIPQNGERLLEYDkHGKLLNTVSG 256 Methanocaldococcus ja...
Q9X1D0 144 RVIDQGFKGIYLDRIDSFEYWAQEGvISRRSAARKMINFVLEIAEYVRERKPD-MLIIPQNGENILDFD-DGQLASTVSG 221 Thermotoga maritima MSB8
Q9RWG3 160 RVIAQGFDGVYMDLIDAYQRH-----DNRPGARAEMVAWVCKIAAHARAQNPQ-FVIIPQNAAELIRDP---GYAACVDA 230 Deinococcus radiodura...
Q58872 257 WAVEDLFYDGVEQKTEEEINERIKLLDKVKDS-GKFVLVVDYVDDGTKTNENLKRVEDFINKSLDKGYVPYVAKSDRELD 335 Methanocaldococcus ja...
Q9X1D0 222 WAVENLFYLKTIPLEENETKSRLEYLIRLNRK-GKFILSVDYVDDGSDSFENISRILDYYEKAKRNGCIPYAARSDLELD 300 Thermotoga maritima MSB8
Q9RWG3 231 SGNEETYVYAANRPTEAARQRELLASYRLWQQaGKPVFTIEYANQ-------PALMKSAAERARAAGLIPYVGERSLDKL 303 Deinococcus radiodura...
Q58872 336 ELNTW 340 Methanocaldococcus jannaschii DSM 2661
Q9X1D0 301 EMNVI 305 Thermotoga maritima MSB8
Q9RWG3 304 ILNQP 308 Deinococcus radiodurans R1
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