Conserved Protein Domain Family
PDHac_trf_long

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TIGR01348: PDHac_trf_long 
pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form
This model describes a subset of pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase specifically close by both phylogenetic and per cent identity (UPGMA) trees. Members of this set include two or three copies of the lipoyl-binding domain. E. coli AceF is a member of this model, while mitochondrial and some other bacterial forms belong to a separate model. [Energy metabolism, Pyruvate dehydrogenase]
Statistics
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PSSM-Id: 273566
Aligned: 4 rows
Threshold Bit Score: 743.618
Created: 8-Oct-2014
Updated: 25-Oct-2021
Structure
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Aligned Rows:
Sequence Alignment
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Format: Row Display: Color Bits: Type Selection:
P06959         3 IEIKVPDIGA--DEVEITEILVKVGDKVEAEQSLITVEGDKASMEVPSPQAGIVKEIKVSVGDKTQTGALIMIFDSADG- 79  Escherichia col...
Q59638         3 ELIRVPDIGN--GEGEVIELLVKPGDKVEADQSLLTLESDKASMEIPSPKAGVVKSIKAKVGDTLKEGDEILELEVEGG- 79  Pseudomonas aer...
WP_010893389   5 KEAFVPDIGDy-SNVPVIEVLVAVGDTVSKGQSLITLESDKATMEVPSSTAGIIKEIKVKVGDTLSQGHVVALIEV---- 79  Xylella fastidiosa
WP_027480295   3 TELKLPDVGDniEKGTVVTVLVNPGDSVTEGQPIIEIETDKAVVEVPASAAGTIEAVNVKVGDTIPVGGVIATLGGGAAs 82  Deinococcus rad...
P06959        80 --------------------------------------AAdaapaQAEEKKEAAPAAApaaaaakdvnvpdigsdevevt 121 Escherichia col...
Q59638        80 --------------------------------------EQ-----PAEAKAEAAPAQPeap------------------- 97  Pseudomonas aer...
WP_010893389  80 ----------------------------------------------SEETAGVTTPMT---------------------- 91  Xylella fastidiosa
WP_027480295  83 asdsapsasapspangggdqaanvestpatdsgtaqrvAQa----QQDAQKEQAGQPT---------------------- 136 Deinococcus rad...
P06959       122 eilvkvgdkveaeqslitvegdkasmevpapfagtvkeikvnvgdkvstgslimvfevageAGAAAPAAKQEAAPAAApa 201 Escherichia col...
Q59638        98 ----------------------------------------------------------kaeAPAPAPSESKPAAPAAA-- 117 Pseudomonas aer...
WP_010893389  92 -------------------------------------------------------------VNTPATRAHNAAPPEDG-- 108 Xylella fastidiosa
WP_027480295 137 -------------------------------------------------------------SGGTADANQAQATPSEGq- 154 Deinococcus rad...
P06959       202 paAgVKEVNVPDIGG-D-EVEVTEVMVKVGDKVAAEQSLITVEGDKASMEVPAPFAGVVKELKVNVGDKVKTGSLIMIFE 279 Escherichia col...
Q59638       118 --S-VQDIKVPDIGS-AgKANVIEVMVKAGDTVEADQSLITLESDKASMEIPSPASGVVESVSIKVGDEVGTGDLILKLK 193 Pseudomonas aer...
WP_010893389 109 --GsLIEVRVPDIGD-YsNVPVIEVLVTVGDTVSKDQSLITLESDKATLEVPSSATGVIKQLKVNVGDTLSQGDIVVVLQ 185 Xylella fastidiosa
WP_027480295 155 -sSgGQQVTLPDVGDnIeKGTVVTILVNVGDTVSEGQPVIELETDKAVVEVPANASGTVQSVAVKIGDSIPVGGTILTLS 233 Deinococcus rad...
P06959       280 VEGAAPAAA--PAKQEAAAPAPAAKAEAPAAAPA-AKAEGKS---EFAENDAYV------HATPLIRRLAREFGVNLAKV 347 Escherichia col...
Q59638       194 VEGAAPAAEeqPAAAPAQAAAPAAEQKPAAAAPApAKADTPApvgAPSRDGAKV------HAGPAVRMLAREFGVELSEV 267 Pseudomonas aer...
WP_010893389 186 SAESTPLTPatNKPALPPNSSPARDAISAPASPAgTPSTPPItfdANTVLPSKIp-----YASPAVRLLARQLGVDLSRI 260 Xylella fastidiosa
WP_027480295 234 GAASTQPTApaPESAQPASQSQQSTQPEPARPAGaPQAQAAApqqSGTQNPQTFdgrpvvPAAPSVRRLAREIGIDIHAV 313 Deinococcus rad...
P06959       348 KGTGRKGRILREDVQAYVKEAIK------RAEAAPAATGGGiPGMLPWPkvDFSKFGEIEEVELGRIQKISGANLSRNWV 421 Escherichia col...
Q59638       268 KASGPKGRILKEDVQVFVKEQLQ------RAKSGGAGATGG-AGIPPIPevDFSKFGEVEEVAMTRLMQVGAANLHRSWL 340 Pseudomonas aer...
WP_010893389 261 KGSEKNGRITREDVQKFVNATVGtgipegRTPSASITTNGG-LNLLPWPnvDFSKFGEIETQPLSRIKKISGANLARNWA 339 Xylella fastidiosa
WP_027480295 314 HGTGIAGRISEEDVRRTAGTPSV------QAQASAASAAAPaPMAAPLP--NFEKWGTVRREDMSGIRKATVRSMTTAWT 385 Deinococcus rad...
P06959       422 MIPHVTHFDKTDITELEAFRKQQNe-eAAKRK--LDVKITPVVFIMKAVAAALEQMPRFNSSLSEDGQRLTLKKYINIGV 498 Escherichia col...
Q59638       341 NVPHVTQFDQSDITDMEAFRVAQK---AAAEK--AGVKLTVLPILLKACAHLLKELPDFNSSLAPSGKALIRKKYVHIGF 415 Pseudomonas aer...
WP_010893389 340 MIPHVTQFDQADITELEALRVQINkenAAPNKngTGIKLTVLAFLIKASAAALKKFPTFNASLDATGETLTLKKYFHIGF 419 Xylella fastidiosa
WP_027480295 386 TIPMVTHFDKADVTAMEETRKRFG---ARVEK--EGGKLTMTHILMKVVANALRKFPKFNASLDLGAEQVIYKEFVNIGV 460 Deinococcus rad...
P06959       499 AVDTPNGLVVPVFKDVNKKGIIELSRELMTISKKARDGKLTAGEMQGGCFTISSIGGLGTTHFAPIVNAPEVAILGVSKS 578 Escherichia col...
Q59638       416 AVDTPDGLLVPVIRDVDRKSLLQLAAEAADLADKARNKKLSADAMQGACFTISSLGHIGGTGFTPIVNAPEVAILGVSKA 495 Pseudomonas aer...
WP_010893389 420 AADTPNGLVVPVIRNVDQKGIVEIAQETSDLAKKARDGKLTPADMSGGCFSISSLGGIGGTAFTPIINAPEVAILGVSKS 499 Xylella fastidiosa
WP_027480295 461 AVDTPVGLLVPVVKDADRKGITELVLDLSELAGRARERKLKPDEMQGATFTISNLGGIGGNAFTPIVNSPEVAILGVSRG 540 Deinococcus rad...
P06959       579 AMEPVWNGK--EFVPRLMLPISLSFDHRVIDGADGARFITIINNTLSDIRRLVM 630 Escherichia coli K-12
Q59638       496 TMQPVWDGK--AFQPRLMLPLSLSYDHRVINGAAAARFTKRLGELLADIRTLLL 547 Pseudomonas aeruginosa PAO1
WP_010893389 500 LIQPIWDGT--QFAPKMLLPLSLSYDHRVIDGALAAHFTTYLSQILADMRRVLL 551 Xylella fastidiosa
WP_027480295 541 GFEPVWNKEkgEFEPRNMLPLSLTYDHRLIDGADAARFLRYICESLEDPFLISL 594 Deinococcus radiodurans
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